Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00769 ATGGGGCGATACGTTCTTTGGACGCATTTCATTTTGGTATGGGCTGTGTACTCTTCCTTCTTTACGCCATTGGAATTCGGATTCTTCAGGGGTCTCCCCAAGAATCTCTTCCTCCTCGACGTTGCCGGCCAGATCGCCTTTCTCATCGATATCGCTGTTCACTTTTGTGTTGCCTATCGCGATTCCCATTCTTACCGCTTTGTCTACGACCGTAATCTCATCGCTATCAGATATTTGAAGTCTCGATTTGTGGTTGACTTAATGGGTTGTATGCCCTGGGACGCCATCTACAAGGCTTCTGGTAAGAAGGAGCTTGTGAGATATTTACTATGGATTCGGCTAAGTCGAGCCTTAAGAGTTACTGAATTCTTTGAGAAATTGGAGAAGGATATACGAATAAATTACCTTGGTACAAGAATTGCGAAGCTTTTTGTTGTGGAGCTTTATTGTACTCATACAGCTGCCTGTATTTTCTACTATCTTGCTACTACTCTACCTCCGTCAAAAGAAGGGTACACCTGGATAGGAAGCCTAAAGTTGGGGGACTATAGCTATTCAAACTTTAGAGAAATTGATCTTTGGAAGCGTTACATCACATCATTATATTTTGCTGTTGTAACTATGGCAACTGTTGGTTATGGTGACATGCATGCAGTCAATGTCAGGGAAATGATTTTTATCATGATTTTTATCTCCTTTGATATGATTCTTGGTTCTTACTTGCTTGGTAACATGGCAGCATTGATAGTAAAAGGATCAAAAACAGAAAAGTTTAGAGATAAAATGAAGGACGTTATTAAATACGTGAATAAAAATAAGCTCAATAGGAAATTAAGTAAAGACATCAAAGATCATCTTCAATTACAGTACTGCCACTCCTCTGAGTTTGGTGTTCTTCAAGATATTCCAGCTTCAATTCGTGCCAAGATATCACAGAAATTGTACGAGCCATACATTAAGGAAGTCTCTCTTTTCAAAGGTTGCTCTCAGGGATTCATAAAACGAATTGCAACCAAAGTTCGTGAAGAGGCTTTTTTCCCTGGACAAATGATTATTGAACGTGAAAACTTAGTTGACCAACTCTATGTTGTATGTCATGGTGAATTGGAGGAAGTTGAAAACTGGGATACTGAAGATGAAGAGTTAATTAGGTGTCTTGGAACATATAGCTCATTTGGCGAAATTTCTTTCCTTTGCAATTCTCCTCATCCTTACCATGTTCGGGTTCGTGAGTTTTCCAAGATCTTGCAACTCGATAAACTATCATTTAAAGAAACCTTGGAATTACACTTTTTAGATGGACAGATCATCTTAGACAATGCCCTTGAGGGAAAGGATTCCAACCAACAAGATCAAATTTTGGAATCTGACATAATTCTTTACATTCAAAAGCGTGAACTTGAGTTAGCCATTAAGGTCAACTGTGCTGCTCATGATGGGGATCTAAATCAACTCAAACGGTTGATTAAAGCAGGAGCAGATCCCAATAAAACAGATTATGATGGAAGATCGCCTCTGCATTTTGCTGCATCGAAAGGATATGAATCTATTGCTTGTTTTCTTATTGAACAAGGAGCACAAGTTAATGTTCCAGATAAGTTTGGGAACATGCCTTTACTTGAAGCCATTCAGAATGGACATGAGCAAGTAGCTTCTTTACTTGCCAGAGCTGGAGCAACCATTGATGCTAATGATGCTGGTGGACTTCTTTGTTCTACTGTCGCAAGAAGGGATTTGGGTTTTCTGAAAGGGCTTCTGGCTAATGGCATTGATCCAAATGCTAGAAACTATGATCAACGGACTCCACTTCACATAGCTGTCTCAGAAGGTTTGTATCCTTTTGCAGAGGTCCTTTTAAATGCTGAAGCCAGTGTTTTTGCAACGGACAGATGGGGAAATACTCCGCTTGATGAAGCTCGTACCAGAGGAAATAAGAATTTGATCAGGCTACTTGAAGTTGCAAGAATTTTTCAGTCACCTGAAAGCAACTATGATATATCCGAAGAGATTCAA 2013 39.59 MGRYVLWTHFILVWAVYSSFFTPLEFGFFRGLPKNLFLLDVAGQIAFLIDIAVHFCVAYRDSHSYRFVYDRNLIAIRYLKSRFVVDLMGCMPWDAIYKASGKKELVRYLLWIRLSRALRVTEFFEKLEKDIRINYLGTRIAKLFVVELYCTHTAACIFYYLATTLPPSKEGYTWIGSLKLGDYSYSNFREIDLWKRYITSLYFAVVTMATVGYGDMHAVNVREMIFIMIFISFDMILGSYLLGNMAALIVKGSKTEKFRDKMKDVIKYVNKNKLNRKLSKDIKDHLQLQYCHSSEFGVLQDIPASIRAKISQKLYEPYIKEVSLFKGCSQGFIKRIATKVREEAFFPGQMIIERENLVDQLYVVCHGELEEVENWDTEDEELIRCLGTYSSFGEISFLCNSPHPYHVRVREFSKILQLDKLSFKETLELHFLDGQIILDNALEGKDSNQQDQILESDIILYIQKRELELAIKVNCAAHDGDLNQLKRLIKAGADPNKTDYDGRSPLHFAASKGYESIACFLIEQGAQVNVPDKFGNMPLLEAIQNGHEQVASLLARAGATIDANDAGGLLCSTVARRDLGFLKGLLANGIDPNARNYDQRTPLHIAVSEGLYPFAEVLLNAEASVFATDRWGNTPLDEARTRGNKNLIRLLEVARIFQSPESNYDISEEIQ 671
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5866479 5890556 + Carg22313-RA Car06g00769 150505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00769 671 Pfam Ion transport protein 6 249 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Car06g00769 671 ProSiteProfiles Ankyrin repeat profile. 534 566 IPR002110 GO:0005515
Car06g00769 671 Pfam Ankyrin repeats (many copies) 585 639 IPR002110 GO:0005515
Car06g00769 671 Pfam Cyclic nucleotide-binding domain 345 428 IPR000595 -
Car06g00769 671 ProSiteProfiles Ankyrin repeat profile. 501 533 IPR002110 GO:0005515
Car06g00769 671 ProSiteProfiles cAMP/cGMP binding motif profile. 324 427 IPR000595 -
Car06g00769 671 ProSiteProfiles Ankyrin repeat region circular profile. 501 533 - -
Car06g00769 671 Pfam Ankyrin repeats (3 copies) 476 565 IPR002110 GO:0005515
Car06g00769 671 ProSiteProfiles Ankyrin repeat region circular profile. 598 630 - -
Car06g00769 671 ProSiteProfiles Ankyrin repeat region circular profile. 534 565 - -
Car06g00769 671 ProSiteProfiles Ankyrin repeat profile. 598 630 IPR002110 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00769 Car-Chr6:5866479 Car15g00679 Car-Chr15:3778794 2.80E-07 dispersed
Car16g00344 Car-Chr16:2125422 Car06g00769 Car-Chr6:5866479 5.08E-56 dispersed
Car06g00769 Car-Chr6:5866479 Car04g02227 Car-Chr4:18066473 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00769 K21867 - tcc:18604419 964.526