Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00798 ATGGGTAAGAAGGGAGGCTCCTCCTGGTTGACTGCTGTCAAAAGGGCTTTTAGATCTCCTTCCAAGGATGAAGACGACAAGAAAAGAGAGAAGCGGAGATGGATTTTCAGGCGATCCACCAATCTACACGACACGGATACTCACCAAACGCCATTGGCTACGGAACATGCATCTTCCGAGGCAGCGCTTGCGGTTGCGGTGGCTACTGCTGAAGCTGCTGTCGCCACTGCTCAAGCGGCTGTGGAGATTGCTCGCCTACCTACTCGGCCTTCCAATCACGCTAGATATCACTATGCTGCGATTGTTATTCAGACCGCTTTTAGAGGATACTTGGCAAGGAGGGCTCTGCGTGCGCTGAAGGGGTTGGTGAAGTTGCAGGCTTTGGTGAGGGGTCACAACGTGAGAAAACAGGCGAAGATGACCCTTCGATGCATGCAAGCTCTGGTTCGAGTGCAAGCCCGTGTGCTCGATCAGCGGATGAGACTCTCCCATGACGGCAGTAGAAAATCCACCTTCAGCGACACAAATAGCGTCCTTGGATCGCGTTATCTCCAAAACTTCTCCGATAGAAAATCCGTTTCTCAGTCAAGGGAGGGAAGTAGCACTGTCACAGACGATTGGGATGAACGGCCCCACTCTGTTGAAGAAGTGAAAGCTATGCTTCAACATAGAAAAGAGATCGCCATGAAGCGTGATCGAAATCTCTCCCACGCCTTCTCTCAACAGATATGGCGGAGAGGTCGAAGTCCATCCATGGGAAGCGGAGATGATCTAGAAGAAAGACCCAAATGGCTGGATCAATGGAATTCAAGGAAGCCATTGGAAAACAGGGGAAGAGCTTCAACGGATCAAAGAGACCCCATAAAAACAGTCGAAATCGACACCTTCCAGCCCTACTCTCACCGGAGAACGGTTCAGAATCAACAAAGAACAAATCCACATTCCGGCAGCTCGCCACTCCACCGGTCGCAACAAAACATACCCTGTTTCCACCACTCACCAGCCACACCGTCCCCATCTAAAACACGGCCTCTGCTAGTCCGGTCCGCAAGCCCACGTATCATCAGAGACGACAAAAGCGAAAACACATCCCAAACACCAAGCTTAAGGTCAAACTACTACTACAGTGGCAATTTACTTCAACAAAGTAGAACAGCAGCAAGTAGCAGCTATAGCCAAGGCAATTGTTTGCCGAATTACATGGCAGCCACAGAGTCCGCAAAGGCACGATTACGGTCACATAGCGCGCCAAGACAACGGCCATCAACGCCGGAGAGGGAGAGAGGAGTTGGGTCAGCAAAAAAACGGCTATCATTCCCAGTTCCGGATCCAAATGGGTATGGCGTTTACGAGCGAAATTTGAAAAGTCCAAGCTTCAAGAGCGTAAGTGGTACGTACTTTGGGATGGAGCAGCAATCAAATTACTCATCTTGCTGCACCGACAGCCTCGGCGGAGAGATTTCCCCTTCTTCAACGACGGATCTAAGAAGATGGCTAAGGTGA 1503 50.57 MGKKGGSSWLTAVKRAFRSPSKDEDDKKREKRRWIFRRSTNLHDTDTHQTPLATEHASSEAALAVAVATAEAAVATAQAAVEIARLPTRPSNHARYHYAAIVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRMRLSHDGSRKSTFSDTNSVLGSRYLQNFSDRKSVSQSREGSSTVTDDWDERPHSVEEVKAMLQHRKEIAMKRDRNLSHAFSQQIWRRGRSPSMGSGDDLEERPKWLDQWNSRKPLENRGRASTDQRDPIKTVEIDTFQPYSHRRTVQNQQRTNPHSGSSPLHRSQQNIPCFHHSPATPSPSKTRPLLVRSASPRIIRDDKSENTSQTPSLRSNYYYSGNLLQQSRTAASSSYSQGNCLPNYMAATESAKARLRSHSAPRQRPSTPERERGVGSAKKRLSFPVPDPNGYGVYERNLKSPSFKSVSGTYFGMEQQSNYSSCCTDSLGGEISPSSTTDLRRWLR 500
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6155668 6157931 - Carg24186-RA Car06g00798 150534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00798 500 MobiDBLite consensus disorder prediction 1 30 - -
Car06g00798 500 MobiDBLite consensus disorder prediction 407 447 - -
Car06g00798 500 MobiDBLite consensus disorder prediction 297 345 - -
Car06g00798 500 Pfam IQ calmodulin-binding motif 123 139 IPR000048 GO:0005515
Car06g00798 500 Pfam IQ calmodulin-binding motif 99 117 IPR000048 GO:0005515
Car06g00798 500 MobiDBLite consensus disorder prediction 419 433 - -
Car06g00798 500 Pfam Protein of unknown function (DUF4005) 351 450 IPR025064 -
Car06g00798 500 MobiDBLite consensus disorder prediction 190 211 - -
Car06g00798 500 MobiDBLite consensus disorder prediction 480 500 - -
Car06g00798 500 MobiDBLite consensus disorder prediction 241 371 - -
Car06g00798 500 ProSiteProfiles IQ motif profile. 120 147 IPR000048 GO:0005515
Car06g00798 500 ProSiteProfiles IQ motif profile. 96 124 IPR000048 GO:0005515
Car06g00798 500 MobiDBLite consensus disorder prediction 252 290 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00798 Car-Chr6:6155668 Car17g00469 Car-Chr17:3354633 4.12E-179 dispersed
Car06g00798 Car-Chr6:6155668 Car15g00406 Car-Chr15:2112389 3.46E-42 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00798 - - csv:101221270 676.396