Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00807 ATGATGAATTTGAAGCATTCCCTTTTCTTTGCTACCCTTCTTTCTCTTTCACTTACTCCTTGTTTTTGCTTCAATCCCAAATCCCTTAATCTCTCCAACTATGACTCCTACGATTCTAATTCCGGCTGGTCCCCGGCCGTCGCCACCTGGTACGGCAGCCCTGTCGGCGCCGGGAGCGACGGAGGTGCGTGTGGGTATGGAAGCGCGGTGGGGAAACCACCATTCTCGTCGTTGATTGCGGCGGGAGGCCCTTCCTTGTTCAAATCCGGCAAGGGCTGTGGTGCTTGTTATCAAGTGAAGTGCTCGGTAAAGGGCGCGTGCTCCCGGAATCCGGTGACGGTGGTTATAACTGACAGTTGTCCTGGCGGTTCCTGTGCTTCCGACGCTGTCCATTTCGATCTCAGCGGCACTGCTTTTGGTGCTATGGCTGCTTCTCGTCGTGCCGATGAGCTCCGCAATCTTGGCGTACTGCAGATTCAATATAAAAGGGTGGAATGCAAATATGGTGGAAGTTCGATCCAGTTCGTGGTGGATGCAGGGTCGAACCCAAACTATTTTGCAACTTTGATCGAATACGAAAATGGAGATGGAGTTCTTGGTTCAGTGGAGTTGAAACAAGCGCAGGGCTCGGGTCCATGGATTCCCATGAAGCAGTCATGGGGTGCAGTTTGGAAGCTGGACTATGGCTCCGCCCTCAAGGCTCCCTTCTCTTTCAGGCTCACTGCCCTGGAATCCAGGAAAGCCGTGGTGGCTAACAACGTGATTCCGGCAGGGTGGCAGCCGGGGAAGACTTATAGATCAGTGGTCAACTTCAAGGCTTAG 822 53.16 MMNLKHSLFFATLLSLSLTPCFCFNPKSLNLSNYDSYDSNSGWSPAVATWYGSPVGAGSDGGACGYGSAVGKPPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSCPGGSCASDAVHFDLSGTAFGAMAASRRADELRNLGVLQIQYKRVECKYGGSSIQFVVDAGSNPNYFATLIEYENGDGVLGSVELKQAQGSGPWIPMKQSWGAVWKLDYGSALKAPFSFRLTALESRKAVVANNVIPAGWQPGKTYRSVVNFKA 273
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6226708 6228441 - Carg24177-RA Car06g00807 150543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00807 273 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 61 171 IPR007112 -
Car06g00807 273 Pfam Lytic transglycolase 80 161 IPR009009 -
Car06g00807 273 Pfam Expansin C-terminal domain 173 256 IPR007117 -
Car06g00807 273 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 184 267 IPR007117 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00090 Car-Chr2:582178 Car06g00807 Car-Chr6:6226708 2.56E-78 dispersed
Car06g00807 Car-Chr6:6226708 Car20g00166 Car-Chr20:913776 9.32E-79 dispersed
Car12g00621 Car-Chr12:4215542 Car06g00807 Car-Chr6:6226708 1.56E-136 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00807 - - cpep:111800083 519.235