Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00820 ATGGAACCATTTTTCAATTACATTCAAGCATCTGATGCGAAAGAAACCATCATTTGCAGCTCTTCCTCTGTCGCAACAAGCCATGGAAATGGACACATCTCTGACAACACAAAACAGAGGACCTCTGAGGAAGAAGATAAGAGCCACCATAATATGTTCAGAGGAGTTCGAAAACGAAACTGGGGCAAATGGGTTTCCGAGATTCGTGAGCCAAGGAAGAAGACCAGGATTTGGCTTGGAACTTACCCAACCGCCGAAATGGCAGCGCGAGCCCACGACGCCGCCGCTCTGGCCATAAAGGGTCACTCTGCATTTCTCAATTTCCCTGAATTGGCTCGGTTCCTTCCTCGCCCACTCTCCAAGTCCCATAAGGACATTCAGGCCGCGGCGGCGCAGGCGGCTGCCACCACATTTTCGGAGGGAAACAACCGTGAGGGTGAAGGAAGGGAAGCGGCGGAGAACATGGAGACTCTGTTTTCTGGTAGCGACGGCGGAGAAAGAGCAGAGGACTCCACGAACTCCCCGTCGACGGCCGCTAGTGATGAGACATTGTTCGATTTGCCTGATCTGTTCGTCGGAAGTTCTGATTTGAAAGATGGGTTTCTTTGTCATTCTTCGTTATGGCAGTTTTGTGCGGCGGCCGATCATTCTGGTTTCCGGCTGGAAGAGCCTTCGTTTTGGGAGTCCATTTAA 693 51.37 MEPFFNYIQASDAKETIICSSSSVATSHGNGHISDNTKQRTSEEEDKSHHNMFRGVRKRNWGKWVSEIREPRKKTRIWLGTYPTAEMAARAHDAAALAIKGHSAFLNFPELARFLPRPLSKSHKDIQAAAAQAAATTFSEGNNREGEGREAAENMETLFSGSDGGERAEDSTNSPSTAASDETLFDLPDLFVGSSDLKDGFLCHSSLWQFCAAADHSGFRLEEPSFWESI 230
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6333845 6334537 - Carg24163-RA Car06g00820 150556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00820 230 MobiDBLite consensus disorder prediction 24 50 - -
Car06g00820 230 MobiDBLite consensus disorder prediction 159 181 - -
Car06g00820 230 ProSiteProfiles AP2/ERF domain profile. 52 109 IPR001471 GO:0003700|GO:0006355
Car06g00820 230 Pfam AP2 domain 53 102 IPR001471 GO:0003700|GO:0006355
Car06g00820 230 MobiDBLite consensus disorder prediction 166 181 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00820 Car-Chr6:6333845 Car12g00237 Car-Chr12:1595860 7.43E-43 dispersed
Car12g00631 Car-Chr12:4272555 Car06g00820 Car-Chr6:6333845 1.99E-95 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3716 PF00847 AP2 1.60E-14 CL0081 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00820 - - cmos:111449118 451.825