Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00831 ATGAGCGTGAAAACCCCGGCGACGAGGACTCGCGTTGGCAAGTACGAGCTCGGTAAAACCCTTGGCGAGGGCTCTTTTGCGAAGGTCAAGTTCGCCAAGAACATTGAGAATGGTGATTGTGTCGCCATCAAGATTCTTGATCGTGAACAAGTCCTTCGACACAAGATGGTCGAACAGATTAAAAGAGAGATATCGACTCTGAAAGTGATTAAGCATCCAAATGTTGTTCAGATTTATGAGGTTATGGCAAGCAAATCGAAAATCTACATTGTTCTTGAGTTTGTAGAGGGAGGCGAGCTCTTTGACAAAATAGCTACAAAGGGAAGGCTTAAAGAGGACGAGGCAAGGAAATATTTCCATCAACTTATTAATGCTGTAGATTACTGCCATAGTAGAGGCGTGTACCATCGAGATTTGAAGCCTGAAAATCTTCTTCTCGACTCGCATGGTGTTCTTAAAGTATCAGATTTCGGATTGAGTGCATTTTCGCAGCAAGTTCATGTGTCTGTTTCATATAATATCAAGGGATCACCAACACTATTATTGCAGGGGGATGGTCTTCTTCACACTGCCTGTGGGACTCCAAACTATGTAGCGCCCGAGGTCTTCCATGATAAAGGTTATGATGGTCAATCATCTGATGTTTGGTCATGTGGGGTTATTCTCTTCGTTCTTATGGCAGGCTTCTTGCCTTTCAGCGAGTCAAATCTAACGCATTTGTATCGAAAAATTTCCAGGGCTGATTTCTGCTTTCCGTCGTGGTTCTCAAATGGTGCTAGAAAACTAGTTCGTCGCATTCTCGATCCAAACCCTCTTACTCGAATAACGATAGCCGAAATTCAACAAGATGAATGGTTCAAGAAGGGCTACACACCCACCCACTTTGAAGTGGAAGAGGATATAACTCTCGATGATGTCGATGCTGCTTTTAGCAGCTCGAGGGAACATCTTTTGACCGAAAAGAAAGAGAAACCGGTGTCGATGAATGCTTTTGAGCTTATCTCTAGGTCTCCGGGTTTCAGTCTTGAAAATCTATTTGAGAAGCAGAAGGCTGTTGCAAAGAGAGAAACCCAGTTTACTTCACAGAGCCCTGCAAACGAGATCATGTCGAAGATCGAAGAAACTGCAAAACCTATGGGGTTCAATATTAAAAAACGGGACTACAAGATGAAGCTGCAAGGTGACAAGACTGGGAGGAAAGGACACCTCTCCATAGCTACTGAGGTGTTCGAGGTGGCTCCTTCCTTGCATATGGTGGAGCTCCGAAAAACTGGTGGCGATACGCTCGAGTTTATCAAGGCATGTTACCAGTATTCTTATTGA 1323 44.07 MSVKTPATRTRVGKYELGKTLGEGSFAKVKFAKNIENGDCVAIKILDREQVLRHKMVEQIKREISTLKVIKHPNVVQIYEVMASKSKIYIVLEFVEGGELFDKIATKGRLKEDEARKYFHQLINAVDYCHSRGVYHRDLKPENLLLDSHGVLKVSDFGLSAFSQQVHVSVSYNIKGSPTLLLQGDGLLHTACGTPNYVAPEVFHDKGYDGQSSDVWSCGVILFVLMAGFLPFSESNLTHLYRKISRADFCFPSWFSNGARKLVRRILDPNPLTRITIAEIQQDEWFKKGYTPTHFEVEEDITLDDVDAAFSSSREHLLTEKKEKPVSMNAFELISRSPGFSLENLFEKQKAVAKRETQFTSQSPANEIMSKIEETAKPMGFNIKKRDYKMKLQGDKTGRKGHLSIATEVFEVAPSLHMVELRKTGGDTLEFIKACYQYSY 440
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6542016 6546158 - Carg20919-RA Car06g00831 150567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00831 440 Pfam Protein kinase domain 15 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00831 440 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Car06g00831 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Car06g00831 440 ProSiteProfiles Protein kinase domain profile. 15 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00831 440 Pfam NAF domain 325 385 IPR004041 GO:0007165
Car06g00831 440 ProSiteProfiles NAF domain profile. 323 347 IPR018451 GO:0007165
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00831 Car-Chr6:6542016 Car13g00407 Car-Chr13:6590710 0 dispersed
Car12g00643 Car-Chr12:4319502 Car06g00831 Car-Chr6:6542016 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88941 PF00069 Pkinase 5.00E-71 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00831 - - csv:101203531 743.806