Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00850 ATGAAGATTGAAGATGGGTTGCGGGGTGTGGGTGGGAAGGATGAGGATAAGACTGTGGTGGCTGCTGTTTTGGGTACTCGTGCTTTTAATTACATGATGTCTTGCTCTGTTTCGAATGAGAATCTGTTTATGGCTGTGAGGAATGATGATAATTTGCAGAACAAGCTTGCGGATCTGGTAGAGACACCCAACGCTTCTAATTTTTGTTGGAATTATGCAATTTTCTGGCAACTTTCCCATTCAAAATCTGGTCAATGGGTTTTGGGATGGGGAGATGGATCGTTTAGGGATCCTAGGGATGGTGAAGGAACAGAAGCTACGCAGATTCTTAGCCTTGAGCTTGAAGATGAGAGCCAACAAAGGATGAAGAAAAGGGCATTGCAGAAGCTTCATACACTGTTTGGTGGGTCTGATGAGGATAATTATGCTCTTGGATTGGATAGAGTTACTGATACTGAGATGTTTTTTCTTGCTTCCATGTACTTCTCCTTTCCTGGTGGAGAGGGGGGTCCTGGGAAGTGTTTCGCTTCTGGGAAACATGTCTGGCATTTGGATGTGCTCAATTCGCCTGCTGAGTATTGTGTGAGGTCCTATCTGGCTAAGTCGGCTGGGATTCGGACCGTCGTTTTGGTGCCAACTGATGTTGGAGTAGTTGAATTGGGTTCTGTGAGATCTGTGAGTGAGAGCTTAGAGTTGGTGCATTTGATTCGATCGTTGTTTTCATCTCAACGTTCGCTTGATGGAGTGAGGACATCGGCTCTGATGTCGAGGATGGCTGAAAGGAAGGATGAAAACGCCCCGTTTCCTAGTTTGGGGATTGCAGAAAGAGGAGGAGGTGGGGTTCCTAAGGTTTTTGGGCAGAGTTTGAACTCGGGGAACGTGGGTCGATCTCATTTCAGAGAGAAACTGGCGGTTAGGAAGATGGATGAAAGGGCATGGGAAGTATGTCCCAATGGAGGTAGAATTCAGTTTCAAAGCCCTCGAAATGGCATTCGTAATCCAAGTTTGGGGCATGTTCATCTTCTCAAACCGGGGAATCCTACCGAAACTTTAGGCTCTCCAACTCCACCGGTAAATAATAATCACGAGCAGCTTGTCAATGGAGTTAGAGATGAATTTTGTCTCAATCCCTATCAATCACAGAAGATAGCCCAAATGCAAATTGATTTCTCTGTAGCAACACCAAGGCCGCCTTCTGTGATGAACCGTGTAGGTACAGATTCTGAACAATTAGATATAGAGCCTCAATGCAAAGAAGAGGGACCTGGCACCGATGAAAGACGACCACGCAAACGAGGCAGAAAGCCTGCAAATGGAAGGGAGGAACCACTAAATCACGTGGAGGCAGAGAGGCAGCGTCGTGAGAAGTTGAACCAGCGGTTCTATGCTTTACGAGCTGTTGTACCCAATATCTCGAAGATGGACAAAGCTTCACTGCTAGGAGATGCCATTGCTTACATTAATGAGCTTCAGTCCAAAGTGAAAGCCATGGAATATGAAAGGGAGCAATCCGGGGTCACCTCAAGTGAAGCAACCCCTTCGGAAACGAACCCAGAAATTGAAAACAAAGATCAATTCCTTGACGTTGACATCGATGTCGAAGCAGGTAATGACGAAGTCATCGTTAAGGTTAGCTGCCCATTAGAGTCACACCCTGCATCAAGAGTTATCAAGGCAATGAAAAATGCACAGATCAATGTTGTTGATTCAAAACTGTCTGTTGAAGTAAACGATACAGTTTTGCACACGTTTACGATCAAATCCCCCGGATCAGAGCAGTTGACGAAGGAAGAGTTGATAGCCACAATTTCGCAGGATTCAACTCCGTTACATCCTCTATCAACAGTTGGGTAG 1854 45.69 MKIEDGLRGVGGKDEDKTVVAAVLGTRAFNYMMSCSVSNENLFMAVRNDDNLQNKLADLVETPNASNFCWNYAIFWQLSHSKSGQWVLGWGDGSFRDPRDGEGTEATQILSLELEDESQQRMKKRALQKLHTLFGGSDEDNYALGLDRVTDTEMFFLASMYFSFPGGEGGPGKCFASGKHVWHLDVLNSPAEYCVRSYLAKSAGIRTVVLVPTDVGVVELGSVRSVSESLELVHLIRSLFSSQRSLDGVRTSALMSRMAERKDENAPFPSLGIAERGGGGVPKVFGQSLNSGNVGRSHFREKLAVRKMDERAWEVCPNGGRIQFQSPRNGIRNPSLGHVHLLKPGNPTETLGSPTPPVNNNHEQLVNGVRDEFCLNPYQSQKIAQMQIDFSVATPRPPSVMNRVGTDSEQLDIEPQCKEEGPGTDERRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQSKVKAMEYEREQSGVTSSEATPSETNPEIENKDQFLDVDIDVEAGNDEVIVKVSCPLESHPASRVIKAMKNAQINVVDSKLSVEVNDTVLHTFTIKSPGSEQLTKEELIATISQDSTPLHPLSTVG 617
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6669385 6671238 + Carg20900-RA Car06g00850 150586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00850 617 MobiDBLite consensus disorder prediction 342 362 - -
Car06g00850 617 MobiDBLite consensus disorder prediction 501 520 - -
Car06g00850 617 MobiDBLite consensus disorder prediction 348 362 - -
Car06g00850 617 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 52 240 IPR025610 -
Car06g00850 617 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 441 490 IPR011598 GO:0046983
Car06g00850 617 MobiDBLite consensus disorder prediction 412 452 - -
Car06g00850 617 Pfam Helix-loop-helix DNA-binding domain 445 491 IPR011598 GO:0046983
Car06g00850 617 MobiDBLite consensus disorder prediction 396 452 - -
Car06g00850 617 MobiDBLite consensus disorder prediction 502 520 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g00850 Car14g01916 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00579 Car-Chr6:3330995 Car06g00850 Car-Chr6:6669385 3.46E-28 dispersed
Car06g00850 Car-Chr6:6669385 Car16g01097 Car-Chr16:9398140 6.21E-76 dispersed
Car14g01916 Car-Chr14:14708829 Car06g00850 Car-Chr6:6669385 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3717 PF14215 bHLH-MYC_N 3.50E-52 CL0161 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00850 - - csv:101208845 1043.11