Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00860 ATGTTGGAATGCTTACACAGAGGATTAACACAAATAGGCTTCAAACCAGAATTTTGGAAGAAAATTCTTGATCCACAGAAGTCATTTCTTCAGCAATGGAACAAGATATTTGTGCTGTCCTCTGTCATAGCAGTAGCTGTGGACCCTATCTTCTTCTACGTCCCAGTATTTGATAAAGACCGTCAATGCCTAACCATGGACCAAGATCTTATGACCATTACTTGTGTTCTTCGTTCATTCATTGACTTATTTTATCTACTTCACATGATCTTTGAGTTTCGAACTGGTTTTCTTCCCCCTTCTTTGCCTGTGTTTGGAAGTGGTGAATTAATTGAAAACCCAGCAGCTATAGCAAAGAGATATCTTTTCTCAAACTTCTTGATTGATATCTTATCCATTCTCCCACTGCCTCAGGTTTTGGTATTAGTAATCATACCTGCAGCGAAAGATCCAATTCCAACAAAGACAGAGAACATCGTGAAGATTGCGGTTCTTTTGCAGTATATTCCTAGGCTTCTTCGAATTTATCCACTATACAGAGAAGTAACCAAAAACTCTGGCATACTGACAGAAACTGCTTGGAGTGGAGCTGCCTTCAATCTTCTTATTTATTTGCAAGCTTGTCATGTTGTTGGTGCCATTTGGTATTTGTTATCAATAGAACGCCAAACCAAATGCTGGCTTGTGGCATGCATGAAAGATGACTGTACAGACAATTTTTTGTACTGTGAACGTCGTAGTAAACCAATGTCCTCTTCTACAATTAAGTTTTGCTCTCCTAAGAAATCTAAAGATGACAAGACAAAGACCTTCGACTTTGGGATGTATGCTAAAGCCCTTGAGTTTGACTTTACCAAGACGAGTTTTCGCCACAAATTCTTCTATTCATTCTGGTGGGCTCTGCAAAATGTCAGCTCAAGTGGACAAAACCTTAAAGTAAGCAACTACATGGGGGAGGTTCTTTTTGCTGTCTTCATAGCCATCCTTGGTTTGGTTTTATTTGCCTTACTCATTAGCAATGTTCAGAAATACCTTCAGTCAACAACCGTTAAAATAGAGCAGATGAGAATCAACCGACGAGATATCGAGCATTGGATGGCACATCGTATGCTCCCGGAGGACTTAAGGCAGCGTATTAGACGATACGATCAATACAAATGGCAGCTAAACAGAGGAGTTAAGGAAGAGGAACTCATTACTAACCTTCCTAAAGACCTTAGGAAAGACATCAAACGCCATCTTTGCTTGTCCCTTCTTAAAAAAGCGACACTTTTTAGCAACATGGACAAGCATCTACTAGACTCGATGTGCGAATATCTCAAGCCAGTGTTATTCACAAAGAGGAGCTTCATTCTGCAAGAGGGTGACCCAATTGATATGATGCTATTCATCATGAAAGGAAAGCTAGCTAACATTATAACTTTTGGTTGGAACAACAAGCCTTACACGGACATACTTAAAGCAGGCGACTTCTGTGGTGAAGAGCTAGTTCAATGGGCAATGGATCCAACCTCCACTTCTCTTCCCATTTCAGCTAGAACAGTTGAGTCTCTTACTGAGGTTGAAGCCTTTGCTTTAAAGGCTGATGACCTGAAATTTGTGACCAGTCAGTTCCATTTCCAGCGCCTTAATAGCAAGCAATTTCAGCTCAGAGTGAGATTCTATTCTCATCAATGGAAAGTTTGGGCAGCCTATAAGGTACAAGAAGCTTGGCATGATTACGTTGAAAGAAAGAAGAGAGGGGGTGGAGATGGTAGATTTCAAGATGCATTGGCTAAAACAGTTGGTGTCTCGGCGAGCTTTGGCGCCACTCTATATGCATCCATGTTTATATCATATCTGTTGCTTGCTGTGCAGCGTGATCACCACCAGAAAACTGCTCCTTTCACACGAGTGATGACGCTACCGCCGCCTCCGAAGTCAGATGATAAGCAAGACGAGCCAAACTTCACCATCTTGAATCGTTAA 1968 41.26 MLECLHRGLTQIGFKPEFWKKILDPQKSFLQQWNKIFVLSSVIAVAVDPIFFYVPVFDKDRQCLTMDQDLMTITCVLRSFIDLFYLLHMIFEFRTGFLPPSLPVFGSGELIENPAAIAKRYLFSNFLIDILSILPLPQVLVLVIIPAAKDPIPTKTENIVKIAVLLQYIPRLLRIYPLYREVTKNSGILTETAWSGAAFNLLIYLQACHVVGAIWYLLSIERQTKCWLVACMKDDCTDNFLYCERRSKPMSSSTIKFCSPKKSKDDKTKTFDFGMYAKALEFDFTKTSFRHKFFYSFWWALQNVSSSGQNLKVSNYMGEVLFAVFIAILGLVLFALLISNVQKYLQSTTVKIEQMRINRRDIEHWMAHRMLPEDLRQRIRRYDQYKWQLNRGVKEEELITNLPKDLRKDIKRHLCLSLLKKATLFSNMDKHLLDSMCEYLKPVLFTKRSFILQEGDPIDMMLFIMKGKLANIITFGWNNKPYTDILKAGDFCGEELVQWAMDPTSTSLPISARTVESLTEVEAFALKADDLKFVTSQFHFQRLNSKQFQLRVRFYSHQWKVWAAYKVQEAWHDYVERKKRGGGDGRFQDALAKTVGVSASFGATLYASMFISYLLLAVQRDHHQKTAPFTRVMTLPPPPKSDDKQDEPNFTILNR 655
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6707727 6711790 - Carg20890-RA Car06g00860 150596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00860 655 Pfam Ion transport protein 32 350 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Car06g00860 655 MobiDBLite consensus disorder prediction 628 655 - -
Car06g00860 655 ProSiteProfiles cAMP/cGMP binding motif profile. 424 508 IPR000595 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g00860 Car14g01909 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00918 Car-Chr2:6511197 Car06g00860 Car-Chr6:6707727 4.65E-101 dispersed
Car06g00860 Car-Chr6:6707727 Car12g00767 Car-Chr12:7356547 0 dispersed
Car14g01909 Car-Chr14:14674545 Car06g00860 Car-Chr6:6707727 0 wgd
Car16g00057 Car-Chr16:383395 Car06g00860 Car-Chr6:6707727 1.10E-106 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00860 K05391 - csv:101206492 973.77