Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00904 GAGCTCTCTCCGTCAGTTCCAGGAATTTTCGCGTTCGAGGAATCGGCGAATCGCGACAAGCGGCAAAGCAGAACGGAGGATCTTACTGAGTTTGTTTATCTGAAATCGCACTCAGTTTGCTGTACTGTCGCTTTGTTTATGATGGTTGAGTTCATGTTGTTCATGAGCATCATGAAATTGTTGAACCGGCCTAGTTTTAGAGAGGCAAAACGTTGGAGGAATATTCTTGGGTTTAGTTCATATGGAGTTTTGAAGATTCAGTTTCTTAGAGTTTCTTGTCATGGCGGTTGTCGAGCTGGTCCAACTAATTATGCAGAAGCTTCACCAATTATGATCAGCTCACGCAGAGAAATTGTAGAAGAGCCAGTAAGAGCTATTAGTGAAGATGTAATTTGTGTTGCTGTTGGGAAAGATGTGAAAGAGTGCTTATCAGTTTTGAGGTATGCGCTAAAATCTTCACATGGGAAGAAGATTTGCCTCCTCCATGTTCATGTCCCTGCACAGATGATTCCATTAATGGGAACCAAATTTCCAGCGAACTCATTGCAGAAAGAGGAAGTGAGAGCATATCATAAGTTCGAGAAGCAAAATTTGCGGAGGATCATGAATGAGTATATTCTGTACTGTCTTCAAGAAGGGGTTCAAGCTGAGAGATTATGTGCTGAAGCTGAGAGTATCGAAAAGGGAATAGTTGATATGATTTCCCTGCACGGTATTAAAAAGCTTGTTATGGGAGCAGCTGTAGACAAGTGCTATTCGAGGAGAATGGTGGATCTGAAGTCTAAGAAAGCCTTTTATGTGCGCTCACAGGCACTTGCTTCTTGTCACATTGAGTTTATCTGCAAGGGGAACCTCATCTGCACCAGGGAGGGTAGATCGGATGGAGCTCAAGTAGAAGCTGCAGTTACATCGCCACAAACAAGTCCAGACGCTGAGGCCCCGGAAATTTCCCAATGCAGATCTCAGTCATGTCCATTGGAGCAGGTTAACAGCAGGGAAGTCGGGACTCCATCTTCGGATTTACGTTTTAGAGGGAGATCATTGCTTGTTGACCATTTTAGAGAGAGCATAGTAGATCCTTCTCCTTCTCCAAATATTATGAACGGGGTTCGAACTGCAAGAAGCTTGGACGTTAATGAGACTTTTGACGAATTGAGTTTATTGGAAAGGAGAAGTCCATATGAAAGGTCAGACAATTCCTTGCGCTCTCCTCGTGGCGTGATCGACATGGCTCCTTCTCCACTTTCCAGGGTCGAGTTATGTGAAAATGGGCTGGAGCAGGATGGGAAAACCAGTTCTTACCTTTACAATCAATATGAACGGGTGATGATGGAGGCTACAAACGCAAGGCGTGACGCATTTTTGGAGGCAATTGCGCGTAGAAAATCTGAGAAAGAGGCCGTTAATGCTCTATGCAAGGTTAAAGCTGCAGAAGGGTTATATGCTGAAGAACTGAAACAAAGGAAGGAGGTTGAACAAGAACTAGAAAGGGAAAAGGCTAAACTTGAAAGCATAAAGAAGCAACTAAATGAAGGGATGGAAGAGCTCCGGATAGCTCAAGATCAGAAAGCAAGCCTTGAGAGAGAACTTTTGGAATCTGATCTGACGGTGAAGGAGTTGGAGCAAAGGATTCTTTCTGCTGTTGAATTGTTACAAAGTTACAAAAGAGAGCGAGAGGAGTTGCAGATTCAACGCGACAATGCTCTTACGGAAGCAGAGGAGCTTAGAAAAAATCAATCTGCTGGCACGATTCTTCCGCAGTTCTTTATGGAGTTCCCGTTTCGGGAGATCGAGGAAGCTACTAGAAACTTCGATCCTTCCCTGAAGATTGGAGAAGGCGGATATGGGAGTATATATAAAGGCTTCTTGCGCCATACCATGGTGGCTATAAAAATCCTACATTCTGATAGCTCTCAAGGCCCCTCTGAATTTCAACAAGAGGTTAATGTTTTAAGTAAGATGAGACATCCCAATCTTGTCACGCTCATTGGAGCTTGTCCCGAAGCTTGGGTTCTTGTCTACGAATACCTCTGTAATGGAAGCCTCGAGGATAAGCTCAGCTGCAAGAACAATGCTCCGCCTTTACCTTGGCAAACACGAATACGCATCGCTACTGAGTTATGCTCGGCCATTATGTTTCTTCATTCAAGTAAGCCCCACAGCATCATTCATGGTGATTTGAAACCTGCAAATGTATTACTTGATGCTAACTTTGTATGCAAGCTTGGTGACTTTGGAATTTGTCGCTTATTGTCTCGGGATGAAACGCCGAACGACAATGAAACACTTGTTTGGAGAACTGACAATCCCAAGGGAACTTTTCCTTACATGGATCCTGATTATCTTTCGTCTGGAGAGCTAACGACGAAGTCGGATGTTTATTCGTTCGGGATTATACTGTTACGATTGTTAACTGGTAGATCTGCAATAGGGATATCAAAGGAAGTCCAATATGCAGTGGGAAATGGAAAGTTAAAATCCATTTTGGATCCTTTAGCGGGCGATTGGCCATTCGTGCAGGCTGAACAGCTCGCTCGATTGGCCTTGAGGTGTTGTGATATGAACCGAAAGAGTCGCCCCGATCTCATTACAGATGTCTGGAGGGTGCTTGGACCAATGAGAGCTTCCTGTGGAGGCCTATTGTCCATCCAACTCGGTTCGTCCGAACACTTGCAACCTCCCCCTTACTTCATCTGTCCCATCTTTCAGGAAGTCATGCTGGATCCACATGTGGCTGCAGATGGTTTTACGTACGAAGCAGAGGCGGCGAGAGGATGGCTAGACAGTGGACATGATACTTCGCCAATGACGAATCTTAGGCTCGAGCACCGCAACCTCGTCCCCAACCGTGCTCTTCGTTCAGCTATACAGGAATGGCTCCAAAGGAACTGA 2892 44.92 ELSPSVPGIFAFEESANRDKRQSRTEDLTEFVYLKSHSVCCTVALFMMVEFMLFMSIMKLLNRPSFREAKRWRNILGFSSYGVLKIQFLRVSCHGGCRAGPTNYAEASPIMISSRREIVEEPVRAISEDVICVAVGKDVKECLSVLRYALKSSHGKKICLLHVHVPAQMIPLMGTKFPANSLQKEEVRAYHKFEKQNLRRIMNEYILYCLQEGVQAERLCAEAESIEKGIVDMISLHGIKKLVMGAAVDKCYSRRMVDLKSKKAFYVRSQALASCHIEFICKGNLICTREGRSDGAQVEAAVTSPQTSPDAEAPEISQCRSQSCPLEQVNSREVGTPSSDLRFRGRSLLVDHFRESIVDPSPSPNIMNGVRTARSLDVNETFDELSLLERRSPYERSDNSLRSPRGVIDMAPSPLSRVELCENGLEQDGKTSSYLYNQYERVMMEATNARRDAFLEAIARRKSEKEAVNALCKVKAAEGLYAEELKQRKEVEQELEREKAKLESIKKQLNEGMEELRIAQDQKASLERELLESDLTVKELEQRILSAVELLQSYKREREELQIQRDNALTEAEELRKNQSAGTILPQFFMEFPFREIEEATRNFDPSLKIGEGGYGSIYKGFLRHTMVAIKILHSDSSQGPSEFQQEVNVLSKMRHPNLVTLIGACPEAWVLVYEYLCNGSLEDKLSCKNNAPPLPWQTRIRIATELCSAIMFLHSSKPHSIIHGDLKPANVLLDANFVCKLGDFGICRLLSRDETPNDNETLVWRTDNPKGTFPYMDPDYLSSGELTTKSDVYSFGIILLRLLTGRSAIGISKEVQYAVGNGKLKSILDPLAGDWPFVQAEQLARLALRCCDMNRKSRPDLITDVWRVLGPMRASCGGLLSIQLGSSEHLQPPPYFICPIFQEVMLDPHVAADGFTYEAEAARGWLDSGHDTSPMTNLRLEHRNLVPNRALRSAIQEWLQRN 963
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6998994 7004646 + Carg24649-RA Car06g00904 150640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00904 963 MobiDBLite consensus disorder prediction 299 337 - -
Car06g00904 963 Coils Coil 474 578 - -
Car06g00904 963 ProSiteProfiles Protein kinase domain profile. 604 897 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00904 963 Pfam Protein kinase domain 609 860 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00904 963 MobiDBLite consensus disorder prediction 299 338 - -
Car06g00904 963 ProSitePatterns Serine/Threonine protein kinases active-site signature. 722 734 IPR008271 GO:0004672|GO:0006468
Car06g00904 963 Pfam U-box domain 894 963 IPR003613 GO:0004842|GO:0016567
Car06g00904 963 ProSitePatterns Protein kinases ATP-binding region signature. 610 631 IPR017441 GO:0005524
Car06g00904 963 ProSiteProfiles U-box domain profile. 892 963 IPR003613 GO:0004842|GO:0016567
Car06g00904 963 Coils Coil 949 963 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00543 Car-Chr1:3224962 Car06g00904 Car-Chr6:6998994 2.33E-06 dispersed
Car02g00581 Car-Chr2:4431413 Car06g00904 Car-Chr6:6998994 7.26E-150 dispersed
Car06g00904 Car-Chr6:6998994 Car17g00399 Car-Chr17:2644490 0 dispersed
Car07g00513 Car-Chr7:2583501 Car06g00904 Car-Chr6:6998994 7.15E-85 transposed
Car14g01849 Car-Chr14:14344847 Car06g00904 Car-Chr6:6998994 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88943 PF00069 Pkinase 8.00E-41 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00904 - - csv:101211387 1451.8