Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00916 ATGTCAATATATGATTCCTCATTCTTTAACACGGCGCTCTCTAAACGGACCTCCATTTTCGGCCTTCATCTCTGGGTTGTAATCGGAATCGTAGTCGGAGCCTTAATAGTTCTCGCACTGTTTCTTCTTTCACTTTGCCTCACTTCTCGCAAGCGGAATCGCCATAAGAACAAAATCCGTTTCCCTAAGTCCACAGCCGACCATTCTCCTCCCATTTCGAAAGAAATCCAGGAAATCGTCCATAACGCGGTACCGGATCATCACCACCATGTGCAGCCGGAGATTCATGTCGAGATCGGAAAATTGGAGCATCGAGTTGTTTTCTCTGATAGGCCGTCTAGTGGGGAGAGCAGAGGCGCTGTGAGTGAAACTGCTTCGCTTGGATCTGGTACTGTTGGGCCTGAAGTTTCGCATCTTGGTTGGGGCAGATGGTATACTCTTAGAGAGCTCGAGGCGGCCACTAATGGCTTGTGTGAAGAGAACGTGATTGGAGAAGGTGGGTATGGGATCGTGTATTTAGGCACTTTGGGAGATGGTACAAGAATTGCTATCAAGAATCTCTTGAATAACAGGGGTCAAGCTGAGAGGGAATTTAAAGTGGAAGTTGAAGCAATTGGAAGAGTAAGACACAAGAATCTTGTCAGGCTGCTAGGATATTGCGTTGAGGGTGCATATAGAATGCTTGTTTACGAGTACGTTAACAATGGCAATCTAGATCAGTGGCTTCATGGCGACGTCGGGGATGTGAGCCCCTTGACGTGGGAGATTCGTGTTAACATCATACTCGGAACGGCAAAGGGATTAGCCTATCTTCATGAGGGTCTTGAACCAAAGGTTGTCCATCGTGATGTAAAATCTAGCAACATATTGCTTGATCGTCAGTGGAATGCTAAAGTATCTGATTTCGGGCTAGCCAAGCTTCTTTGTTCCGAAAGGAGCTATGTGACGACCCGTGTAATGGGTACATTTGGCTATGTTGCGCCCGAGTACGCTTGCACGGGAATGTTGAATGAGAAGAGTGATGTTTATAGCTTTGGAATTCTAATTATGGAGATAATTTCTGGGCGGAGCCCTGTCGATTATAGTAGACCTCAAGGAGAGGTGAATTTGGTGGATTGGTTGAAAGCAATGGTTGGAGATAGAAGATCCGAGGAAGTGGTTGACCTCAAGTTGCCGGAGAAGCCTCCTTCCAAAGCTCTAAAACGTGTTCTGCTGGTCGCTCTTCGGTGTGTCGATCCTGATGCTTCGAAGAGGCCGAAAATGGGACATGTCATCCACATGCTTGAGGCAGATAATTTGCTGTCTAATGATGAATACCGGGTCGGTAAGGATGCTTCTCATTCAACTCAAGGTAATCAACACGGTCTGAGACGAGTTAACCATCAGAAAGACGAAGGAACATGTTCTAATATAAGTGAAGGTGACAGTGATGGGAACATTCAACGTCCAAGTAGGTGGAGATAA 1464 46.31 MSIYDSSFFNTALSKRTSIFGLHLWVVIGIVVGALIVLALFLLSLCLTSRKRNRHKNKIRFPKSTADHSPPISKEIQEIVHNAVPDHHHHVQPEIHVEIGKLEHRVVFSDRPSSGESRGAVSETASLGSGTVGPEVSHLGWGRWYTLRELEAATNGLCEENVIGEGGYGIVYLGTLGDGTRIAIKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVNNGNLDQWLHGDVGDVSPLTWEIRVNIILGTAKGLAYLHEGLEPKVVHRDVKSSNILLDRQWNAKVSDFGLAKLLCSERSYVTTRVMGTFGYVAPEYACTGMLNEKSDVYSFGILIMEIISGRSPVDYSRPQGEVNLVDWLKAMVGDRRSEEVVDLKLPEKPPSKALKRVLLVALRCVDPDASKRPKMGHVIHMLEADNLLSNDEYRVGKDASHSTQGNQHGLRRVNHQKDEGTCSNISEGDSDGNIQRPSRWR 487
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7070802 7073678 - Carg24661-RA Car06g00916 150652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00916 487 ProSitePatterns Protein kinases ATP-binding region signature. 163 185 IPR017441 GO:0005524
Car06g00916 487 ProSiteProfiles Protein kinase domain profile. 157 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00916 487 MobiDBLite consensus disorder prediction 443 487 - -
Car06g00916 487 ProSitePatterns Serine/Threonine protein kinases active-site signature. 279 291 IPR008271 GO:0004672|GO:0006468
Car06g00916 487 Pfam Protein tyrosine and serine/threonine kinase 160 428 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00876 Car-Chr3:6991828 Car06g00916 Car-Chr6:7070802 0 dispersed
Car06g00916 Car-Chr6:7070802 Car19g00506 Car-Chr19:6726105 4.63E-178 dispersed
Car07g00690 Car-Chr7:3543230 Car06g00916 Car-Chr6:7070802 3.73E-20 dispersed
Car12g00513 Car-Chr12:3402851 Car06g00916 Car-Chr6:7070802 8.01E-58 dispersed
Car06g00916 Car-Chr6:7070802 Car05g00148 Car-Chr5:745968 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88945 PF07714 PK_Tyr_Ser-Thr 9.00E-46 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00916 - - cmos:111449863 941.414