Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00922 ATGGAAGTTGATTGGGATCTTCACGCCGTCGTTCGAGGCTACTCCGCCATGACCTCCGCCGCCTCCTCCTCTGCCGTCTCCTCCGCCGCTGTTCCTTCTTCCGACTCTTACTCTGTTTCTTCCAATTCCAATAACTCTGTTTCTATGGCGTTTGGCAGAGATCAAACGAACCGTATGTTGTCGCTTCAAGATCCGTTTGATGGGTCGAATTGTAATTCTACTGAGGAATTGCAGCAGTTTTTTAACCCCTTTTTACCTAAATCTCAACGCTCTCCTCCACTGCCGCCGCCGCCTGCTCCGCCGCTTCTTTCTTCTCCGGCGGTCAAAATTCTGACCCATCAGAAGCAACTACAGAACACCCATCTCCCTAAACAGCTCCATTCAACCTCCGTTTCTGCTCCGAGATCCAAACGCCGGAAGAACCAGTTGAAGAAAGTCTGTCAAGTTCCGGCGGAGGCTCTGTCGTCGGACATTTGGGCTTGGAGAAAATATGGACAAAAACCCATCAAGGGATCTCCATATCCAAGGGGATATTACAGATGTAGTAGTTCAAAGGGTTGCATGGCCCGGAAACAAGTGGAGAGGAACAGATCCGATCCGGGAATGTTCATAGTTACTTACACGGCGGAGCACAACCACCCGGCGCCAACTCATCGGAATTCCCTCGCCGGCTCCACCCGTCAGAAGGCCAACACGCCGACACCCACCGACGTCGGATCGGAAAAACCCGACGCGAAACAGCTCGTTTGCTCGTCCGAAGATCTGAGTACGATCACGGAGAGCAAAGAAGAAGAGAAAGAGGAATCATTGGCGGAAGACGAAGAAGACAACGATCTGGGGGTCTCTGATTTAATCGTCAACGACGATTTCTACGTGGGGTTTGAAGAACTCGACAGTCCTAACGCCGACGACTGCTTTTCCGATGATTTTCCGGCGAGTTTTGGACTTCCATGGCTGTTTAACAATGCTCCAACCGCCACTAGCAGCATTTAA 993 51.26 MEVDWDLHAVVRGYSAMTSAASSSAVSSAAVPSSDSYSVSSNSNNSVSMAFGRDQTNRMLSLQDPFDGSNCNSTEELQQFFNPFLPKSQRSPPLPPPPAPPLLSSPAVKILTHQKQLQNTHLPKQLHSTSVSAPRSKRRKNQLKKVCQVPAEALSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCMARKQVERNRSDPGMFIVTYTAEHNHPAPTHRNSLAGSTRQKANTPTPTDVGSEKPDAKQLVCSSEDLSTITESKEEEKEESLAEDEEDNDLGVSDLIVNDDFYVGFEELDSPNADDCFSDDFPASFGLPWLFNNAPTATSSI 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7155072 7156605 + Carg24938-RA Car06g00922 150658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00922 330 MobiDBLite consensus disorder prediction 88 104 - -
Car06g00922 330 MobiDBLite consensus disorder prediction 121 143 - -
Car06g00922 330 ProSiteProfiles WRKY domain profile. 150 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car06g00922 330 MobiDBLite consensus disorder prediction 210 279 - -
Car06g00922 330 MobiDBLite consensus disorder prediction 84 104 - -
Car06g00922 330 Pfam WRKY DNA -binding domain 157 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car06g00922 330 MobiDBLite consensus disorder prediction 213 238 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00825 Car-Chr2:5964206 Car06g00922 Car-Chr6:7155072 1.63E-53 dispersed
Car06g00922 Car-Chr6:7155072 Car15g00988 Car-Chr15:7577166 5.34E-49 dispersed
Car19g00794 Car-Chr19:8597545 Car06g00922 Car-Chr6:7155072 3.88E-29 dispersed
Car01g00258 Car-Chr1:1432852 Car06g00922 Car-Chr6:7155072 3.23E-35 transposed
Car14g01866 Car-Chr14:14469529 Car06g00922 Car-Chr6:7155072 8.43E-149 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3723 PF03106 WRKY 4.40E-25 CL0274 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00922 K13425 - csv:101217082 446.047