Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00961 AGTTGGAAAACCGAATTCCCGCACGTTCGCAGGGCGGATCTGAAAATGTCTGTTACTTTGCACACAAATCTCGGCGACATCAAGTGCGAGATTTTTTGTGATGAAGTCCCGAAATCTGCCGAGGCAAGTTCATCGCACAACTTTTTGGCACTATGTGCTAGTGGCTACTATGATGGAACCATATTCCACCGAAACATCAAAGGTTTTATGATACAAGGTGGAGATCCAACAGGCACGGGAAAAGGAGGAACCAGCATATGGGGCAAAAAGTTCAATGACGAGATAAGAGAGTCGCTCAAGCACAATGCAAGAGGGATATTATCAATGGCTAATAGTGGAGCAAATACGAATGGAAGCCAATTTTTTATAACTTACGCAAAGCAGCCACATCTGAATGGATTATACACTGTGTTCGGCAGAGTGATTCATGGGTTTGAAGTACTTGATATCATGGAAAAGACACAAACTGGGTCGGGAGATCGTCCTCTCGCCGAGATCAGGCTCAATCGGGTAACGATACATGCTAATCCTCTTGCA 537 44.69 SWKTEFPHVRRADLKMSVTLHTNLGDIKCEIFCDEVPKSAEASSSHNFLALCASGYYDGTIFHRNIKGFMIQGGDPTGTGKGGTSIWGKKFNDEIRESLKHNARGILSMANSGANTNGSQFFITYAKQPHLNGLYTVFGRVIHGFEVLDIMEKTQTGSGDRPLAEIRLNRVTIHANPLA 179
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7390403 7393384 + Carg23896-RA Car06g00961 150697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00961 179 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 21 173 IPR002130 GO:0000413|GO:0003755
Car06g00961 179 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 18 172 IPR002130 GO:0000413|GO:0003755
Car06g00961 179 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 57 74 IPR020892 GO:0003755|GO:0006457
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00830 Car-Chr3:6747321 Car06g00961 Car-Chr6:7390403 2.72E-56 dispersed
Car06g00961 Car-Chr6:7390403 Car07g00574 Car-Chr7:2908569 1.64E-56 dispersed
Car14g01795 Car-Chr14:14033684 Car06g00961 Car-Chr6:7390403 1.59E-117 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00961 K12734 - csv:101211474 320.087