Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car06g00967 | ATGGATCGAGCCGCCGCCGCTCACGGCCGTCATCTTCCGCCGCCGTTCATTTCAAGAGACCTTCAACTCAATCCCCACCACCATTTCCTCCACCAAAACCCCGACCAACACAACGGAAATGATATCTCTGACGGCGGCGGCGCCGTGGAGCACAAGGAGTTAAGCGGCGGCGAGGGCTCGAGACGGCCACGAGGACGCCCGGCTGGGTCGAAGAACAAGCCGAAGCCGCCGATGATAATCACACGCGACAGCGCTAATGCACTACGGTGCCACGTCATTGAAATCGCCAACGCCAACGACGTGATCGAAACCCTAACGATTTTCGCACGTCAGCGCCAACGTGGCATTTGCATTCTGACCGGCGCCGGAGCGGTCACTAACGTCACACTCAAACAGCCGGCTGCCTCCGCCACCGGTGCGGTGATCTCTCTGCCGGGGAGATTTGAGATTCTTTCGCTGTCGGGGTCGTTTCTGCCGCCGCCTGCGCCACCAGTAGCGTCGAGGCTGACCGTATATTTATCGGGCAGGCAGGGGCAGGTTATAGGAGGTAGTGTGGTGGGACCACTTTTGAGTTCGGGACCGGTGGTGATTACTGCGGCTTCGTTTGGAAACGCCGCGTACGAGAGGCTGCCGTTGGAGGACGATGAAATGGCGGTGGAGACAGCGGCGGAGGCTGGAAGTAGTCCGGTTAAGTCGCCGGGAACTGCCGTGCAACAGCCACAATTTTCGCCGGAATTTCATGGAATGGCGCCAAATCTAATGAATACCTGTCAATTGCCGACGGCGCCCTACTGGGGCACAGGTCGTACTCCGCCATTTTAG | 822 | 59.0 | MDRAAAAHGRHLPPPFISRDLQLNPHHHFLHQNPDQHNGNDISDGGGAVEHKELSGGEGSRRPRGRPAGSKNKPKPPMIITRDSANALRCHVIEIANANDVIETLTIFARQRQRGICILTGAGAVTNVTLKQPAASATGAVISLPGRFEILSLSGSFLPPPAPPVASRLTVYLSGRQGQVIGGSVVGPLLSSGPVVITAASFGNAAYERLPLEDDEMAVETAAEAGSSPVKSPGTAVQQPQFSPEFHGMAPNLMNTCQLPTAPYWGTGRTPPF | 273 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 7419418 | 7420239 | - | Carg23902-RA | Car06g00967 | 150703 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car06g00967 | 273 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 89 | 203 | IPR005175 | - | |
| Car06g00967 | 273 | MobiDBLite | consensus disorder prediction | 1 | 79 | - | - | |
| Car06g00967 | 273 | MobiDBLite | consensus disorder prediction | 223 | 243 | - | - | |
| Car06g00967 | 273 | ProSiteProfiles | PPC domain profile profile. | 85 | 225 | IPR005175 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Car06g00967 | Car15g01063 | CCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car05g01151 | Car-Chr5:10998556 | Car06g00967 | Car-Chr6:7419418 | 8.53E-72 | dispersed | |
| Car06g00967 | Car-Chr6:7419418 | Car08g00833 | Car-Chr8:5568596 | 1.12E-79 | dispersed | |
| Car09g00019 | Car-Chr9:111175 | Car06g00967 | Car-Chr6:7419418 | 1.02E-47 | dispersed | |
| Car11g00279 | Car-Chr11:1529945 | Car06g00967 | Car-Chr6:7419418 | 7.51E-50 | dispersed | |
| Car14g01614 | Car-Chr14:13016584 | Car06g00967 | Car-Chr6:7419418 | 3.20E-68 | dispersed | |
| Car15g00111 | Car-Chr15:651206 | Car06g00967 | Car-Chr6:7419418 | 6.53E-60 | dispersed | |
| Car17g00156 | Car-Chr17:964357 | Car06g00967 | Car-Chr6:7419418 | 3.62E-66 | dispersed | |
| Car15g01063 | Car-Chr15:8368800 | Car06g00967 | Car-Chr6:7419418 | 1.40E-90 | wgd | |
| Car17g00027 | Car-Chr17:118146 | Car06g00967 | Car-Chr6:7419418 | 2.18E-95 | wgd | |
| Car02g01275 | Car-Chr2:8548085 | Car06g00967 | Car-Chr6:7419418 | 1.09E-93 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car06g00967 | - | - | csv:101212439 | 433.335 |