Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00974 ATGGACTTCGAAGCTCAGGCTCAGAGCTCGGACGGTTCGTCGACGTCTTCGAAGCTGGTTCTTTATTCTTTCTGGCAGAGCTCCTGCTCGTGGCGTGTTCGCTTTGCGTTGAATCTCAAAGGGCTTTCTTACGAGTACAGAGCAGTGAACCTTGGGAGAGGAGAGCAATTAAGTCCAGATTTTGAGCGCCTAAATCCTCTCAAGTATGTTCCTGTATTAGTAGATGGTGCTGTGGTAGTTTCAGACTCTTTCGCGATTTTACTGTATTTGGAAGAGAAATATCCACAGAAGGCGCTGCTGCCTGCTGATCTTCATTTAAAATCTCTGAATCTGCAAGTGGCAAGTATTGTCAGCTCAAGCATACAGCCTCTTATTATGTTGGGATTGCTGAAAACTATCGAGGAAAAATTTGGTCCAGAAGAGCAACTACCATGGGCTCAGACTAATATAGAAAAGGGTTTCAATGCTCTAGAGAAACTGCTGAAGAATTTTTCTGGCCGATATGCGCTGGGAGAAGAAGTATATATGGCTGATGTATTTTTGGCTCCCCAAGTTTCAGTTGCTTTTGGGAGGTTCAACATTGACTCGTCCAAGTTCCCTACTTTAGCAAGGATTTATGAATCTTACAAGATGTTACCAGAATTCCTAGCCTCCTCACCAGAAAGGCAGCCCGACGCCCTTCACTAG 687 44.83 MDFEAQAQSSDGSSTSSKLVLYSFWQSSCSWRVRFALNLKGLSYEYRAVNLGRGEQLSPDFERLNPLKYVPVLVDGAVVVSDSFAILLYLEEKYPQKALLPADLHLKSLNLQVASIVSSSIQPLIMLGLLKTIEEKFGPEEQLPWAQTNIEKGFNALEKLLKNFSGRYALGEEVYMADVFLAPQVSVAFGRFNIDSSKFPTLARIYESYKMLPEFLASSPERQPDALH 228
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7464725 7467682 + Carg23909-RA Car06g00974 150710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00974 228 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 103 228 IPR010987 -
Car06g00974 228 Pfam Glutathione S-transferase, N-terminal domain 21 97 IPR004045 -
Car06g00974 228 Pfam Glutathione S-transferase, C-terminal domain 142 214 IPR004046 -
Car06g00974 228 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 17 98 IPR004045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00463 Car-Chr2:3616286 Car06g00974 Car-Chr6:7464725 1.73E-86 dispersed
Car02g00464 Car-Chr2:3624686 Car06g00974 Car-Chr6:7464725 2.36E-92 dispersed
Car06g00974 Car-Chr6:7464725 Car13g00962 Car-Chr13:9677033 4.02E-10 dispersed
Car06g00974 Car-Chr6:7464725 Car06g01098 Car-Chr6:8241567 3.08E-14 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00974 K01800 - csv:101213403 364.385