Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00990 ATGGCAGCCATTAAAAGCGTTTCGGTTCTCGTTCTTGTTCTGGTTCTTGGGTCGGCCATTTTTGCTTACTCGGATGACGAAGTGAAAAATTGGTGCAGCCAAACGCCATATCCAGCTCCATGTGAACATTTTCTCACGGCAAAAAAAACGGCCACAGAAAAAAACCGGCCAATCGCTTCAAAATCCCACTTCCTTAAAGTTCTGGTCGAATCGGCCATCGAGCGAGCCGTTTTGGCCCAAAAAAACGCCGTCGCTCTCGGCCCAAAGTGCCAAAACGACCGAGAAAAATCTGCATGGACCGACTGTATCGAGCTCTACGACCAAATCATTCACCGGCTCAACCGGACCGCCGGTCGGTGCTCTCCGGTCGATGTTCAGACCTGGCTCAGTGCTGCTCTCACAGCTCTCGACACGTGTCGAGCTGGGTTTGAGGAGCTTGGGGTTTCGGCTTTCGGCTACTCTTTAACGGCTAATAATGTTTCCAAGCTGATTAGTGATGGGTTGTCGGTGAATAAGCCGGCTTCGGCTGAGGGGTTTGAGCCGCCGAGTATGAATGAAGGGTTTCCGACGTGGGTTAAGCCGGGAGAAAGGAAGCTGTTGCAGTCGAGCGCTCCGAAAGCTAACGTGGTGGTGGCGAAGGATGGGTCTGGGAGATTTAGGACGGTGAGTGAGGCGGTCGCCGCCGCGAAGGGCGGAGGAAGGTTTGTGATTTATGTGAAGGCCGGGGTTTATAGTGAGAATGTTGAGATTAAGGCTAAGAATGTTATGTTGATCGGCGATGGCATCGGAAAAACTATCATCACCGGAAGTAGGAGCGTCGGCGGCGGTTCCACCACTTTTAAATCCGCCACCGTTGAATTCTAA 864 52.08 MAAIKSVSVLVLVLVLGSAIFAYSDDEVKNWCSQTPYPAPCEHFLTAKKTATEKNRPIASKSHFLKVLVESAIERAVLAQKNAVALGPKCQNDREKSAWTDCIELYDQIIHRLNRTAGRCSPVDVQTWLSAALTALDTCRAGFEELGVSAFGYSLTANNVSKLISDGLSVNKPASAEGFEPPSMNEGFPTWVKPGERKLLQSSAPKANVVVAKDGSGRFRTVSEAVAAAKGGGRFVIYVKAGVYSENVEIKAKNVMLIGDGIGKTIITGSRSVGGGSTTFKSATVEF 287
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7563693 7564640 + Carg06369-RA Car06g00990 150726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00990 287 Pfam Plant invertase/pectin methylesterase inhibitor 27 167 IPR006501 GO:0004857
Car06g00990 287 Pfam Pectinesterase 208 285 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00990 Car-Chr6:7563693 Car14g01771 Car-Chr14:13895966 1.18E-153 dispersed
Car06g00989 Car-Chr6:7551686 Car06g00990 Car-Chr6:7563693 9.40E-25 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00990 K01051 - csv:101217552 419.468