Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01024 ATGACGAAGTGGAATTCTCTATCTGCTTCGCTTATGAAGCGGCTGAAGCTTCACTATCAGATGAAGAACAGTATTCCGGCGATAGCACAGGCGAGATCCTTCACTACAAGCGAGGGGCATCGTCCTACCATTATTCATAAACGTAGTCTCGATATTCTTCACGATCCGTGGTTTAATAAAGGAACAGCCTTTTCAATGACAGAACGGGACCGGCTTGATCTTCGAGGACTTCTTCCACCAAATGTAATGTCTTCAGAGCAGCAAATTGAACGATTTATGGTTGACCTGAAGAGGCTTGAAGTTCAAGCAAGAGATGGGCCTTTAGATCCAAATGCTTTGGCCAAATGGCGAATTCTGAATAGATTGCATGATAGAAATGAGACAATGTACTATAAGGTTTTGGTCGCTCACATCAAGGAGTATGCGCCAATAGTATATACACCAACCGTAGGTCTTGTTTGTCAGAACTATAGTGGCTTGTTTAGAAGGCCAAGGGGAATGTATTTCAGTGCAGAAGATCGTGGAGAAATGATGTCAATGGTTTATAATTGGCCTGCTGAACAGGTTGATATGATTGTTGTTACGGATGGAAGTAGAATATTAGGTCTTGGAGATCTTGGAGTACATGGAATCGGTATTGCAATTGGGAAGTTGGATATATATGTTGCTGCTGCTGGGATAAATCCTCAGAGGGTGCTTCCAGTCATGATTGACGTTGGAACCAATAATGAAGAGCTTCTGAAGAACCCCTTATATTTGGGATTGCAAGAACACCGATTGGATGGGGATGAGTATTTGGCCGTTATCGATGAGTTCATGGAGGCAGTGTTTACTCGCTGGCCACATGTTATTGTTCAATTTGAAGATTTCCAAAGCAAATGGGCCTTTAAGTTATTGCAACGATACAGAAATACCTACAGAATGTTTAATGATGACGTTCAGGGAACGGCAGGAGTTGCTATTGCCGGGCTTTTAGGTGCTGTGAGAGCACAAGGAAGACCGATGATCGACTTTCCAAAGCAAAAGATTGTTGTTGCTGGTGCTGGAAGTGCAGGAATTGGGGTTTTAAACGCGGCAAGGAAAACCATGGCAAGGATGTTGGGAAACAATGAATCAGCATTTGAGGCTGCTCGAAGCCAATTTTGGGTGGTCGATGCCCAGGGTTTGATCACAGAGGAACGAGAAAACATTGATCAAGATGCAAGCCCATTTGCAAGGAAGGTCAAAGAAATTAATCGTCAAGGATTGAGGGAAGGTGCAAGTCTAGTGGAAGTGGTACAAAAAGTGAAACCTGATGTGCTGCTGGGATTGTCTGCAGTTGGTGGATTGTTCACAAAGGAGGTATTAGAGGCTCTTAAAGGATCAACGGCGACAAGACCTGCTATTTTTGCCATGTCTAATCCTACAACAAATGCCGAGTGCACTCCTGAACAAGCATTCTCAATCTTGGGTGAAAACATCATATTTGCGAGTGGAAGCCCATTCAAGGATATTAATTTTGGGAATGGTCATATTGGCCACTGCAACCAAGGAAACAACATGTATCTTTTCCCAGGTATTGGGCTCGGTACTCTTCTATCTGGCGCTCCTATCGTATCTGATGGCATGCTGCAGGCTGCTGCCGACCTCGCTGCATATATGACTGAAGATGAAGTCCACGAAGGAATCATTTATCCATCAATTTCCAGAATCCGTGATATTACAAAGGAAATCGCAGCAGCTGTTATTATGGAAGCGATAGAAGAGGATCTTGTTGCAGGATACCGTGATGTAGATGCTCGAGACCTCCAAAAATTTAACAAGGAACAAATTTTGGAATTTGTGAAGATCAAC 1833 43.43 MTKWNSLSASLMKRLKLHYQMKNSIPAIAQARSFTTSEGHRPTIIHKRSLDILHDPWFNKGTAFSMTERDRLDLRGLLPPNVMSSEQQIERFMVDLKRLEVQARDGPLDPNALAKWRILNRLHDRNETMYYKVLVAHIKEYAPIVYTPTVGLVCQNYSGLFRRPRGMYFSAEDRGEMMSMVYNWPAEQVDMIVVTDGSRILGLGDLGVHGIGIAIGKLDIYVAAAGINPQRVLPVMIDVGTNNEELLKNPLYLGLQEHRLDGDEYLAVIDEFMEAVFTRWPHVIVQFEDFQSKWAFKLLQRYRNTYRMFNDDVQGTAGVAIAGLLGAVRAQGRPMIDFPKQKIVVAGAGSAGIGVLNAARKTMARMLGNNESAFEAARSQFWVVDAQGLITEERENIDQDASPFARKVKEINRQGLREGASLVEVVQKVKPDVLLGLSAVGGLFTKEVLEALKGSTATRPAIFAMSNPTTNAECTPEQAFSILGENIIFASGSPFKDINFGNGHIGHCNQGNNMYLFPGIGLGTLLSGAPIVSDGMLQAAADLAAYMTEDEVHEGIIYPSISRIRDITKEIAAAVIMEAIEEDLVAGYRDVDARDLQKFNKEQILEFVKIN 611
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 7770304 7781960 - Carg06335-RA Car06g01024 150760
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car06g01024 611 ProSitePatterns Malic enzymes signature. 309 325 IPR015884 GO:0004471
Car06g01024 611 Coils Coil 82 102 - -
Car06g01024 611 Pfam Malic enzyme, NAD binding domain 313 579 IPR012302 GO:0051287
Car06g01024 611 Pfam Malic enzyme, N-terminal domain 123 303 IPR012301 GO:0004471
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Car06g01024 Car17g00511 CCT
Car06g01024 Car08g00136 CCT
Car06g01024 Car14g01737 CST
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g01024 Car-Chr6:7770304 Car08g00808 Car-Chr8:5430601 0 dispersed
Car08g00807 Car-Chr8:5428146 Car06g01024 Car-Chr6:7770304 4.47E-36 dispersed
Car14g01737 Car-Chr14:13693795 Car06g01024 Car-Chr6:7770304 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01024 K00028 - csv:101204181 1133.24