Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01070 ATGGGTAGCGGAGAAAAGGTCTTCACCTTGAAGGAAGTCGCTGAGCACAACAATCACAAGGACTGTTGGCTCATCATTAGTGGCAAGGTATATGACGTGACCAAATTCTTAGATGACCATCCTGGAGGTGATGATGTTTTGTTATCAGCCACAGGAAAAGATGCAACGGACGATTTTGAAGATGTGGGGCACAGTGACAACGCAAGAGAAATGATGGATCAATACTATGTTGGAGAGATTGATGGTTCGACAATTCCGAAGAAGGTCGCATACACGCCTCCGAAACAGCCTCATTACAATCAGGACAAGACGTCGGAGTTCATCATCAAGCTCCTCCAGTTCCTCGTCCCGCTTGCAATTTTGGGATTGGCAGTTGCCTTACGTTTCTACACTAAACAAGCTTGA 405 45.93 MGSGEKVFTLKEVAEHNNHKDCWLIISGKVYDVTKFLDDHPGGDDVLLSATGKDATDDFEDVGHSDNAREMMDQYYVGEIDGSTIPKKVAYTPPKQPHYNQDKTSEFIIKLLQFLVPLAILGLAVALRFYTKQA 134
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8049560 8052741 + Carg06289-RA Car06g01070 150806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01070 134 Gene3D - 3 84 IPR036400 -
Car06g01070 134 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 6 91 IPR036400 -
Car06g01070 134 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Car06g01070 134 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Car06g01070 134 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Car06g01070 134 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Car06g01070 134 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Car06g01070 134 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Car06g01070 134 SMART Cyt_b5_2 8 81 IPR001199 -
Car06g01070 134 PANTHER CYTOCHROME B5 1 132 - -
Car06g01070 134 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
Car06g01070 134 PANTHER CYTOCHROME B5 1 132 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g01070 Car-Chr6:8049560 Car15g00942 Car-Chr15:6720301 1.47E-66 dispersed
Car05g00397 Car-Chr5:2259404 Car06g01070 Car-Chr6:8049560 1.34E-33 transposed
Car14g01692 Car-Chr14:13456992 Car06g01070 Car-Chr6:8049560 2.01E-94 wgd
Car17g00096 Car-Chr17:556509 Car06g01070 Car-Chr6:8049560 1.48E-74 wgd
Car19g00129 Car-Chr19:1153633 Car06g01070 Car-Chr6:8049560 5.31E-64 wgd
Car02g01436 Car-Chr2:9379656 Car06g01070 Car-Chr6:8049560 1.90E-66 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01070 K23490 - csv:101214209 273.092