Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car06g01101 | ATGGCTGGTCAAGTAAATCTAGCGGTTGGGTGTCTTGTTTGGATTGAGGATCCTGAGGTAGCCTGGATAGATGGGGAAGTAGTGGAAGTTAATGGTCAAGATATCAGAGTACTCTGTTCATCAGGAACTACTGTTGAGGCCAAATCATCAAATGCCTATCCAAAGGATCCTGAATTTCCATCATGTGGTGTGGATGATATGACAAAACTAGCTTATTTACACGAGCCAGGACTGCTACAGAACTTGAAATGTCGTTATGATGTTAATGAAATTTATACCTATACTGGGGGTATACTAATAGCCGTAAATCCTTTTCGAAGACTTCCTCATTTATATGATAATGGCATAATGCAACAATATAAAGGGGCAGATTTAGGTGAGCTGAGCCCGCATCCCTTTGCCATTGCAAATTCTGCATATAGACAGATGATTAATGAGGGTATAAGCCAGTCAATTTTAGTTAGCGGGGAAAGTGGAGCTGGTAAAACGGAGAGTACAAAGATGCTTATGCGCTATCTTGCCCATGTTGGAGGGAGAGATGGAGGGAAGTCTGCAACTGGTGAACGCTCTGTAGAGCAGCAAGTACTAGAGTCCAACCCTGTTCTAGAAGCATTTGGCAATGCAAAGACTGTTAGAAACAATAATTCCAGTCGGTTTGGTAAATTTGTGGAGATCCAATTTGACCGAAGTTGGAGAATTTCTGGAGCTGCTATTAGAACTTATTTATTAGAACGTTCCCGTGTTTGCCAAGTGTCTGATCCTGAGAGGAATTATCATTGCTTTTATATGCTTTGTGCATCAACAGAGGAAGTTGAAAAGTATAAGTTAGGGAATCCAAGAACATTCCATTATCTTAATCAATCTAATTGCTATGAACTTGATGGACTGGACGATTCCAAGGAATATACTTCTACTAGAGAAGCTATGGATGTCGTTGGAATAAGTACAGCTGAGCAGGATGCTATATTTCGAGTGGTAGCTGCAGTACTTCATTTGGGCAATGTTGAATTTGCAAAGGGGAAGGATGCGGATTCCTCTGAACCTAAGGATGACAAATCTCGGTTCCATCTCAAAATGGCAGCAGAGCTATTCATGTGTGATGAGAAGGCTCTTGAAGATTCAATGTGTACTCGTGTGATAGTTACACGTGATGAAACCATAACCAAATGTCTCGATACAGTATCTGCAACTCTTAGTAGGGATGCTTTGGCAAAAATCGTATATTCAAGATTATTTGATTGGATTGTTGATAAGATTAATAACTCAATTGGCCAAGATCGTGATTCAAAACACTTAATCGGGGTTCTGGATATCTATGGATTCGAGAGTTTCAAGACAAACAGGCAAGAGTTTTCGTCTAAGTATCAATACATTGCTAGGGAAAGACCTTACAAATTGGCATCAGATCATAATCTTGGGAGTTTTGAGCAATTTTGTATTAATCTGACAAATGAGAAATTGCAGCAACATTTCAACCAGCATGTGTTCAAGATGGAGCAAGAAGAATATACAAAAGAAGAAATTAACTGGAGTTATATTGAATTTATTGATAATCAGGATGTTCTTGATCTCATTGAGAAGAAACCTGGTGGCGTCATTGCGCTTCTGGATGAGGCTTGCATGTTTCCGAGATCCACACATGAGACTTTTGCTCAGAAACTATATCAAACTTTTAGGGACCATAAGCGATTTAGTAAGCCTAAATTGTCACGAACTGACTTCACAATTTGTCATTATGCTGGCGATGTTACGTACCAAACTGAACTCTTCTTGGACAAAAACAAAGATTATGTTGTTGCGGAGCATCAAGCACTGTTGGGTGCTTCTAAGTGCTCCTTTGTTGCAGGGCTATTCCCCCCTTTACCTGAAGAAACCTCCAAATCATCCAAGTTCTCATCAATAGGGACTAGATTTAAGCAACAACTTCAAACTTTGCTCGAGACACTAAATGCTACTGAGCCACACTACATACGCTGTGTAAAGCCAAACAATCTTCTTAAACCATCCATCTTTGAGAATAATAATGTTTTACAGCAGCTCCGATGTGGGGGAGTCATGGAAGCAATCAGGATCAGTTGTGCTGGATATCCCACTAGGAAGACGTTTGATGAATTTATTGGTCGGTTTACTATCTTGGCACCTGATGTTTTGAAGGGGAGCTCTGATGAAGCCAATGCGTGTAAGAAGCTTTTGGAGAAAGTTAACCTTAATGGGTATCAGATTGGTAAAACCAAAGTGTTTCTTAGGGCTGGTCAAATGGCACAATTAGATGGCTGCCGAACTGAGGTCTTGGGAAGATCTGCTAGTGTTATCCAAAGGAAAGTTCGCTCATATTTGGAACGGAATCGTTTTATTTCGTTGCGGTTGGCTGCTATACAAATTCAAGCACTTTGTAGAGGGGAAGTTGCACGCCAGCAGTATGAAAACATCAGAATGGAAGCTGCTTCTATCAAAATCCAAAAGTATTGGCGCATGTGTTCTGCCCGAAGTTCCTATAAAAGATTGCGCTCTTCAGCTGTAGCTATTCAGGCTGGTATCCATGGCATGGTTGCTCGTAAAGAGCTCAAGTTCAGGAGGGATACAAGAGCTGCAATTATCATTCAGAGTCGATGTCGGCAATACTTGGCCCGTATGCATTATTTAAGGTTAAAAAAAGCTGCGATTACCACTCAATGTGCTTGGAGAGCAAGAGTTGCACGCAGAGAACTTCGCAAGCTTAAAATGGCTGCTAAGGAAACTGGCGCTCTCCAAGCTGCCAAAGATATGTTGGAAAAGCAAGTGGAAGAACTAACATTGAGATTGGAGCAAGAGAAACAAATGAGGGCTGACATGGAGGATGCCAAGACTCAAGAAAACACAAAATTGAAGTCTGCTTTGGAAGAAATACAAACTCAATTTCAGGAAACGAAAGCACTGCTTATTGAGGAACGTGAAGCTGCAAAGAAAGTAGTTGAGGAACGTGAAGCTGCAAAGAAAGTAGTTGAGGAAATCCGTGAAGCTTCAAAGAAAGTAGTTGCGGAAGTCCCAATAGCTGCAAAGAAAGCAGTTGAGGAAGTCCCAGTAGCTGCAAAGGAAGTAGTTGAGGAAGTCCCAGTAGCTGCAAAGAAAGTAGTTGAGGAAGTCCCAATAGCTGCAAAGGAAGTAGTTGAGGAAGTCCCAGTAGCTGCAAAGGAAGTAGTTGAGGAAGTCCCAGTAGCTGCAAAGGAAGTAGTTGAGGAAGTCCCAGTGAAGCAAGTAGTCGAGGAAGTCCCAGTAGCTGCAAAGGAAGTTGTTGAGGAAGTCCCAGTAGCTGCAAAGAAAGTAGTTGAGGAAGTCCCAGTAGCTGCACAGAAAGTAGTTGTGGAAGTCCCAGTCATACAGGAGGTTCCAGTTGTTGATCATGAGCTTATCAATAAGCTAACTACTGAAAATGAAGAACTTAAGGCTCTTGTTAGTTCTTTGGAAAGTAAAATTGATGAAACAGAAAGGAAATTTGAGGAAAGTAACAGACTTAGTGAAGAGCGGCTGAAGCAGGCTACGGAGGCAGAGTCAAAGATAATAGAATTAAAGACTGCCATGCAAAGGCTTGAGGAAAAGTTATCTGACTTGGAAACTGAGGACCAAATTCTGAGGCAGCAAGCACTGCAAAAGCCTCCTTCAAGAAAAATGTCTGGACATATAACAATGCAGCCTTTGGAGAATGGCCACCTTGAATTATTAAGCAATGCACCATCAAAAAAGTATGGTACCGATGCTGATGCAAAATTGAGGAGATCCCAAATTGAAAGGCAGAACGAAGGCATGGATGCTCTATCGAAATACTTAACACGGGATCTTGGGTTCAGTGAGGGAAAACCTGTTGCTGCTTTTGTAATTTATAAATCTCTTCTCCATTGGAGATCATTTGAAGCAGAAAAAACAAGTGTATTTGATCGTCTTATTCAGATAATTGGTTCTGCAATTGAGAATCAGGATGATTATGATCACATGGCTTATTGGTTATCCAACACAACTACATTGTTGTTTCTTCTTCAAAAGAGTTTAAAAGCCACACCAAGAAAGCCTCCCACCCCGACATCATTGTTTGAGCGAATGACCCAAGGGTTTCGTTCATCTTCTGCCAACCTTCCAGTTGGCACCCTTGATGTTGTGCGGCAAGTTGAAGCCAAATATCCTGCTCTACTTTTCAAGCAGCAGCTAACAGCGTATGTAGAAAAGATATATGGAATAGTTAGAGACAACCTGAAGAAGGAACTATCGCCGTTGCTTTCAACTTGTGTCCAATTTTGTAACTTGGATCAAAGTAGCAGCTCTGATGTGTGTTTGATGACATGCAGGCTCCCAAAACTTCGGAAGAGAATATTGAGGAATCATCTGACGAGGCAAAGAGTAGCAGCCTTCTCAATAGTTCATGGGGCAGCATCATCCATCACCTTAATCATCATCTTAGTAGATTGCAGACGAACTTCGTATGTGATAATTTCTGTTGGAGCTCAAGTGAATAATATATCATTTCACTGTGAACTTATGCTAAGCACTTTACAGGTGCCTTCCGTTTTGGTCCAGAAGATATTCACTCAGGTTTTTTCATACATCAACGTACAGCTTTTCAATAGTCTTCTACTTCGTCAAGAGTGCTGCACGTTTAGTAATGGAGAATATGTGAAGTCAGGACTTGCTGAGTTAGAGAGTTGGTGTACCCAAGCCAAAGAAGAGTATGTCGGGTTATCTTGGGATGAGCTAAAACCAGTGAGGCAAGCTGTTGGATTCTTGGTTATTCACCAGAAGTCTAGAATATCTTATGATGAAATTACAAATGACCTCTGTCCAATATTAAGCGTTCAGCAGCTTTATAGAATATGTACTCTTTATTGTGACGACAATTACAATACCAGAAGCGTAGCTGAAGAGGTTATTTCTAGCATGAAGGTTTTGATGCCCGAAGATACCAATGATGAAGACAATAATTCCTTTTTGTTGGATGACAATTCCAGCATACCTTTCTCAGTCGATGACATATCCAGTTCCTTGCAAGATAAGAATTTTCAAGATATTAAGCCTCCAGCAGAACTACTTGAGAATCCGGTCTTCCAATTTTTACAGGAATAA | 5088 | 40.98 | MAGQVNLAVGCLVWIEDPEVAWIDGEVVEVNGQDIRVLCSSGTTVEAKSSNAYPKDPEFPSCGVDDMTKLAYLHEPGLLQNLKCRYDVNEIYTYTGGILIAVNPFRRLPHLYDNGIMQQYKGADLGELSPHPFAIANSAYRQMINEGISQSILVSGESGAGKTESTKMLMRYLAHVGGRDGGKSATGERSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDRSWRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCASTEEVEKYKLGNPRTFHYLNQSNCYELDGLDDSKEYTSTREAMDVVGISTAEQDAIFRVVAAVLHLGNVEFAKGKDADSSEPKDDKSRFHLKMAAELFMCDEKALEDSMCTRVIVTRDETITKCLDTVSATLSRDALAKIVYSRLFDWIVDKINNSIGQDRDSKHLIGVLDIYGFESFKTNRQEFSSKYQYIARERPYKLASDHNLGSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFIDNQDVLDLIEKKPGGVIALLDEACMFPRSTHETFAQKLYQTFRDHKRFSKPKLSRTDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLGASKCSFVAGLFPPLPEETSKSSKFSSIGTRFKQQLQTLLETLNATEPHYIRCVKPNNLLKPSIFENNNVLQQLRCGGVMEAIRISCAGYPTRKTFDEFIGRFTILAPDVLKGSSDEANACKKLLEKVNLNGYQIGKTKVFLRAGQMAQLDGCRTEVLGRSASVIQRKVRSYLERNRFISLRLAAIQIQALCRGEVARQQYENIRMEAASIKIQKYWRMCSARSSYKRLRSSAVAIQAGIHGMVARKELKFRRDTRAAIIIQSRCRQYLARMHYLRLKKAAITTQCAWRARVARRELRKLKMAAKETGALQAAKDMLEKQVEELTLRLEQEKQMRADMEDAKTQENTKLKSALEEIQTQFQETKALLIEEREAAKKVVEEREAAKKVVEEIREASKKVVAEVPIAAKKAVEEVPVAAKEVVEEVPVAAKKVVEEVPIAAKEVVEEVPVAAKEVVEEVPVAAKEVVEEVPVKQVVEEVPVAAKEVVEEVPVAAKKVVEEVPVAAQKVVVEVPVIQEVPVVDHELINKLTTENEELKALVSSLESKIDETERKFEESNRLSEERLKQATEAESKIIELKTAMQRLEEKLSDLETEDQILRQQALQKPPSRKMSGHITMQPLENGHLELLSNAPSKKYGTDADAKLRRSQIERQNEGMDALSKYLTRDLGFSEGKPVAAFVIYKSLLHWRSFEAEKTSVFDRLIQIIGSAIENQDDYDHMAYWLSNTTTLLFLLQKSLKATPRKPPTPTSLFERMTQGFRSSSANLPVGTLDVVRQVEAKYPALLFKQQLTAYVEKIYGIVRDNLKKELSPLLSTCVQFCNLDQSSSSDVCLMTCRLPKLRKRILRNHLTRQRVAAFSIVHGAASSITLIIILVDCRRTSYVIISVGAQVNNISFHCELMLSTLQVPSVLVQKIFTQVFSYINVQLFNSLLLRQECCTFSNGEYVKSGLAELESWCTQAKEEYVGLSWDELKPVRQAVGFLVIHQKSRISYDEITNDLCPILSVQQLYRICTLYCDDNYNTRSVAEEVISSMKVLMPEDTNDEDNNSFLLDDNSSIPFSVDDISSSLQDKNFQDIKPPAELLENPVFQFLQE | 1695 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 8259248 | 8281653 | - | Carg06257-RA | Car06g01101 | 150837 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car06g01101 | 1695 | Coils | Coil | 920 | 1003 | - | - | |
Car06g01101 | 1695 | ProSiteProfiles | IQ motif profile. | 860 | 889 | IPR000048 | GO:0005515 | |
Car06g01101 | 1695 | Pfam | Myosin N-terminal SH3-like domain | 12 | 50 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
Car06g01101 | 1695 | ProSiteProfiles | Myosin motor domain profile. | 62 | 761 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Car06g01101 | 1695 | ProSiteProfiles | IQ motif profile. | 812 | 841 | IPR000048 | GO:0005515 | |
Car06g01101 | 1695 | ProSiteProfiles | Dilute domain profile. | 1304 | 1641 | IPR002710 | - | |
Car06g01101 | 1695 | ProSiteProfiles | IQ motif profile. | 883 | 912 | IPR000048 | GO:0005515 | |
Car06g01101 | 1695 | Coils | Coil | 1172 | 1206 | - | - | |
Car06g01101 | 1695 | Pfam | DIL domain | 1517 | 1619 | IPR002710 | - | |
Car06g01101 | 1695 | Pfam | IQ calmodulin-binding motif | 861 | 880 | IPR000048 | GO:0005515 | |
Car06g01101 | 1695 | Pfam | IQ calmodulin-binding motif | 885 | 904 | IPR000048 | GO:0005515 | |
Car06g01101 | 1695 | Pfam | IQ calmodulin-binding motif | 814 | 833 | IPR000048 | GO:0005515 | |
Car06g01101 | 1695 | Pfam | IQ calmodulin-binding motif | 790 | 807 | IPR000048 | GO:0005515 | |
Car06g01101 | 1695 | Pfam | IQ calmodulin-binding motif | 766 | 784 | IPR000048 | GO:0005515 | |
Car06g01101 | 1695 | ProSiteProfiles | IQ motif profile. | 835 | 864 | IPR000048 | GO:0005515 | |
Car06g01101 | 1695 | ProSiteProfiles | IQ motif profile. | 787 | 816 | IPR000048 | GO:0005515 | |
Car06g01101 | 1695 | Pfam | Myosin head (motor domain) | 64 | 449 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Car06g01101 | 1695 | Pfam | Myosin head (motor domain) | 473 | 749 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Car06g01101 | 1695 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 8 | 57 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
Car06g01101 | 1695 | Coils | Coil | 1130 | 1164 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car04g00475 | Car-Chr4:2684918 | Car06g01101 | Car-Chr6:8259248 | 5.16E-06 | dispersed | |
Car06g01101 | Car-Chr6:8259248 | Car17g01260 | Car-Chr17:9556230 | 0 | dispersed | |
Car13g00592 | Car-Chr13:7705485 | Car06g01101 | Car-Chr6:8259248 | 7.11E-07 | dispersed | |
Car06g01101 | Car-Chr6:8259248 | Car08g00045 | Car-Chr8:251442 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car06g01101 | K10357 | - | csv:101221506 | 1721.83 |