Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01177 ATGGGAAATGAGATGGGAAACAATAACACATCTGAATTTAGAGAGGAAGAACAGGCAAGAACTGATCCAGAAAAATCTTTACTGGAAGGTGGGGCCAACGAAGTCAAAGCGGATGAAGTTGCAGACTTCAGCCAAAAAGAGGCTAGGCCAGGTTCGGATGGTGCAGATAAACTAAATGGAAATCACCATGTCATAGATAAAGAGGAAGAAGGGGAGGGAGTTTCCAATTTGAACACAACAATACTAGCATTAGATGAGCCGAAACCTGAAAAGACTTCAGATTTCAAAAGTACTCAGCATGAATTGCTCAACATTAAAGCCGAATCTTTCACAGAAGATAGCAACAAGTCTCCAGAAGAATGCAAGGATGCTTTGGGATTGAGTTTGAACGACACTTACCATTCAGCAGACTGTGCCATGGCAGATTCAGAAGAAACCACCAATATGGATCGAGTTCTCGGTATTGACCGAGGTATTGATAAGGAAAATGGAGTGAGGGGAAAAGGTTCAAACTTCGACATGATAACACAGGCATCAGAAGATTCAAAAACTAAAAAGATTTCAGATTTTGATGCTGATCGAGTTATTGATACTGATCGAGATGCAGATAAGGAAGATGATAGAGAGAGGGGTAAAGGTTCCAACTTAGATCCAAAATCTGAAAAAACAATAGATTTTCATGTTGATCAGGTTCTTGATACTGATCGAGATACAGAGAAGGAAGGTGATATTGAGAGGGTCAAGGGTTCAAACTGCAATACGATGACACAAGCATCAGAAGACCCAAAATCTGAAAACTTTTCAGATTTTGTTGCTGATCAAGTTATTGATAATGATCAAGAAAAAGGTGATACTGAGAGGATCAAAGGTTCAAACTGCAATACGATGACACAAGCATCAGAAGACCCAAAATCTGAAAACGTTTCAGATTTTGTTGCTGATCAAGAAAAAGATTTTGTTGCTGATCAAGTAATTGATAATGACCAAGAAAAAGGTGATATTGAGAGGATCAAAGGTTCAAACTGCAATACGATGACACAAGCATCAGAAGACTCAAAATCTGAAAACTTTTCAGATTTTGTTGCTGATCAAGTTATTGATAATGATCAAGAAAAACATAATGAAAATGATGGAGCAAGGGGAAAAGATTCCAACTTTGACACGAGAAAACAAGCATCAGAAGATCCAAAATCTGAAACGACTTCAAATTTTGATGCTGATCAAGTTATTGAAACCAATCAAGATACTGATAAGGAAGGTGATGGACTGAAGGAAAAAGTTTCCAACTTCGACATGATAGCACAAGCATTAGAAGATCCAAAATTAAGAAAGCCCTCAGATTTCGATGCTCATCAAGTTATTGATACTCTTCGAGATACAGAGAAGGAGCATGATGCAGAGAAGGGAAAAAGCTACGATGTCAAGACATTACATGTACAGGACGATCCAAAATCTGAAAAGAATTCAGATCTTAAGGCTATTCATCATGAATTGCCTGAAAAGGCAGAATCATTGGGGGGATCAAGTGATGATGGATCCTTACAAGAAAGCAAGTACTGTTTCGGCTCTAGTTTGGAACATACTGAGGAGAATGATCACTTCATGTGCACAGAAAAATTAACTAACGTGGATTGTTTCGGCGCAGAGGCAGAGACAGATATGGAGAAGAACTGTGATATAATAGAGCCAAGGCCATACCATGAAAATACAATGCCAGCAGCCAAAATGATCGATACTAAAGATGAAGAAACTGCGATAGATTTGATCGGTCATAATACTTCATGTTCACAACCGGAAGAGAGTCTGGTGATAGAATTACCGAAGTCATGCATGCAAGTTCCTGAGGTTGAAAACAGATGCACGGTTTTGAAAGAAAAACCCCAATTAAGAGAAGAACAGGGAACTGAAACAATCGTTCAAGACAATCTTCCAACTCAATCTAAGATTTCAAATGAGGTCCAAGAGGAATTTAACACGATTAGGTCGCACTCCGAGGAAAATGCAGCTTCTGAATCTGTTGTCAGAAACCAGAACGAGACTCCTGGAGAAGATTGCGAGGATTCAGATGAAGAATATCTGGAAATTTCTGAACAAGTTATGGAAGTTTTAAATTCATCTATTGGAGATTGCAAGCATAAGAATGAAGGAATGGGAGAGACAACGGAAATTTCAACAAACGTTGGACATGAAGGGGAAAGACGAGAACCAGAGGAAAACTTATTTGAACCTCTTTTAGGGCTTCAACCTCAAAGCCATCAAAAGGAAGCTTCGATCACATTTCAAACTGGAGAAAGTACAGATGAATCAATCTCAACACTGAGGCAAATAACCGAAAAAGCATCTGAAAAATCCAAGAAAAATTCCTCAGACTCTCCACATTATATACAAACAGCTTCAGCAACATTCACAGAAACTAAACCATCGACAAATCCGATCGACGAACAGAATGTAACAACACTTCCCCTCCCAACATTCAGAGAGGAAAATCAAGAATCTCCAGGAAGAACAAGCAACGAATCAAATTCCGACAATTCAGTCGCTCATATCGAAATGCGTAAATCGCCTAGCTTCAATATAGATATCCAAAGCGAAGGAAAGACAGTAGAAACAGAGAAAATTCCATTGTTATACCAGATCAAGACAATCGAAGACTTACAAAATCTGCAGGAGATTAGCTTCCCAAATCCAACGGAGAAGCGAGTTGTAAAGCTAGGAAGAAGCGAATCAGAGAAATCGAGACCTTCATTCCCAGGGTTCGCAAAAGAAAAAGAAGAATCGGAGATGGAATCCACAGCAACCAATCAACATAAATTAGGCGCCACTAAAAACGCAGTGAAAGACTTACCACCGCCATCGCCGATTCGAAAAGGGAAGCGCAGAAGCAAATCCCTAATCTTCGGAACCTGCATCTGCTGTGCTACTGCAATCAATTGA 2934 39.4 MGNEMGNNNTSEFREEEQARTDPEKSLLEGGANEVKADEVADFSQKEARPGSDGADKLNGNHHVIDKEEEGEGVSNLNTTILALDEPKPEKTSDFKSTQHELLNIKAESFTEDSNKSPEECKDALGLSLNDTYHSADCAMADSEETTNMDRVLGIDRGIDKENGVRGKGSNFDMITQASEDSKTKKISDFDADRVIDTDRDADKEDDRERGKGSNLDPKSEKTIDFHVDQVLDTDRDTEKEGDIERVKGSNCNTMTQASEDPKSENFSDFVADQVIDNDQEKGDTERIKGSNCNTMTQASEDPKSENVSDFVADQEKDFVADQVIDNDQEKGDIERIKGSNCNTMTQASEDSKSENFSDFVADQVIDNDQEKHNENDGARGKDSNFDTRKQASEDPKSETTSNFDADQVIETNQDTDKEGDGLKEKVSNFDMIAQALEDPKLRKPSDFDAHQVIDTLRDTEKEHDAEKGKSYDVKTLHVQDDPKSEKNSDLKAIHHELPEKAESLGGSSDDGSLQESKYCFGSSLEHTEENDHFMCTEKLTNVDCFGAEAETDMEKNCDIIEPRPYHENTMPAAKMIDTKDEETAIDLIGHNTSCSQPEESLVIELPKSCMQVPEVENRCTVLKEKPQLREEQGTETIVQDNLPTQSKISNEVQEEFNTIRSHSEENAASESVVRNQNETPGEDCEDSDEEYLEISEQVMEVLNSSIGDCKHKNEGMGETTEISTNVGHEGERREPEENLFEPLLGLQPQSHQKEASITFQTGESTDESISTLRQITEKASEKSKKNSSDSPHYIQTASATFTETKPSTNPIDEQNVTTLPLPTFREENQESPGRTSNESNSDNSVAHIEMRKSPSFNIDIQSEGKTVETEKIPLLYQIKTIEDLQNLQEISFPNPTEKRVVKLGRSESEKSRPSFPGFAKEKEESEMESTATNQHKLGATKNAVKDLPPPSPIRKGKRRSKSLIFGTCICCATAIN 977
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8648280 8651748 - Carg06180-RA Car06g01177 150913

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01177 977 MobiDBLite consensus disorder prediction 289 305 - -
Car06g01177 977 MobiDBLite consensus disorder prediction 365 396 - -
Car06g01177 977 MobiDBLite consensus disorder prediction 903 931 - -
Car06g01177 977 MobiDBLite consensus disorder prediction 1 97 - -
Car06g01177 977 MobiDBLite consensus disorder prediction 339 363 - -
Car06g01177 977 MobiDBLite consensus disorder prediction 157 423 - -
Car06g01177 977 MobiDBLite consensus disorder prediction 658 690 - -
Car06g01177 977 MobiDBLite consensus disorder prediction 179 247 - -
Car06g01177 977 MobiDBLite consensus disorder prediction 726 740 - -
Car06g01177 977 MobiDBLite consensus disorder prediction 750 771 - -
Car06g01177 977 MobiDBLite consensus disorder prediction 249 264 - -
Car06g01177 977 MobiDBLite consensus disorder prediction 10 53 - -
Car06g01177 977 MobiDBLite consensus disorder prediction 903 959 - -
Car06g01177 977 MobiDBLite consensus disorder prediction 59 73 - -
Car06g01177 977 MobiDBLite consensus disorder prediction 307 337 - -
Car06g01177 977 MobiDBLite consensus disorder prediction 800 845 - -
Car06g01177 977 MobiDBLite consensus disorder prediction 709 771 - -
Car06g01177 977 MobiDBLite consensus disorder prediction 658 679 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01177 - - - cmax:111474732 1534.24
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g01585 Car-Chr14:12892598 Car06g01177 Car-Chr6:8648280 3.27E-16 transposed
Car14g01583 Car-Chr14:12891822 Car06g01177 Car-Chr6:8648280 2.06E-12 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g578 . . . . . . . . . . Cma06g01356 . Car06g01177 . Sed02g1355 . . Bhi01g00747 Tan10g0777 Cmetu06g1274 . Hepe05g1595 . Lcy11g1592 . . . . . . . . . . . Lsi05g01648 . . Cme06g00565 . . . . . . . . . Cmo06g01371 . . . . . . . . . . . . . . . . . . . . . . Csa03g01281 Chy06g00533 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008657 0 1 0 0 0 1 2 1 1 1 1 1 4 1 1 3 1 0 1 1 1 1 1 1 1 1 1 3 1 1 33
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Car06g01177 Car_Chr06 FPKM 0.747093 0.451525 0.178677 0.156292 3.128516 2.367007 3.43616 0.015287 0.0 0.122846