Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01193 ATGAACATACTGAAGTTCAAACGAGGCGGGGATCTACCATCTCCGCCGCCATCTCTGTCGCCATCGCCGCCATCCCCATTTCTCCCCAACCAGAGACTCATCAAGGCCTACACAGCTCTCCAAGCATGGAAACATGCCATCACCGACGACCCGACCAACTTCACTGCCGACTGGTACGGCCCCAACGTCTGCAACTACTCCGGCGTCTTCTGTGCCCCTGCTCCCGACGACCCCGACATCCTCACCGTTGCCGGGGTTGACCTCAACAACGCCAACATCTCGGGAACCCTGCCCGACGATCTCGGCCTCCTGACCGACCTTGCCCTGTTCCACATCAATTCCAATCGCTTCTGCGGCACCGTCCCCAACTCCTTCCGTTTCCTCACTCTCCTCTTTGAGCTCGATCTCAGCAACAATGACTTCTCCGGCGAGTTCCCCTCTGTAATTCTCTCTCTCCCTTCCCTCAAATTCCTCGACGTTCGATTCAACAAATTCCACGGCGATCTCCCTTCTTCCCTGTTTGAAAAGAAACTCGATGCTCTGTTCATCAATAACAACGATTTCAAATTCTCACTGCCGGAGAACATCGGCAATTCCCCTGTTTCTGTGCTGGTTTTTGCTAATAACAACATCAATGGCTGCCTCCCCTCGAGTTTGTCAAATATGAACAATACACTCGAAGAAATTATAATCACAAATAGTGGGTTGATTGGGTGTTTGCCGCCGGAAATTGGGTCGCTGAGCAATCTCACCGTTTTCGATGTCAGTGACAACAATCTCGTTGGACCTTTGCCGGAGACAATGGCTGGAATGAAGAAATTGGAGCAGCTAAATATCGCACATAACCAATTATCCGGCGAGATACCGGCGAGTGTCTGCTTGTTGCCGACATTGCAGAACTTCACTTACTCGTATAATTTCTTCTGCAGTGAGCCGTCGATGTGCCTGAAGCTTCAGGCGAGTGATGACCGAAAAAATTGTTTGCCGGAAAGACCACTACAACGCTCGCCGGAGGAATGTAAAGCTCTGTACTCTTACCCTGTTGATTGCGGCGTCTTTGGCTGCACTCGACGGCCGCCACCGCCGCTTTAG 1092 51.74 MNILKFKRGGDLPSPPPSLSPSPPSPFLPNQRLIKAYTALQAWKHAITDDPTNFTADWYGPNVCNYSGVFCAPAPDDPDILTVAGVDLNNANISGTLPDDLGLLTDLALFHINSNRFCGTVPNSFRFLTLLFELDLSNNDFSGEFPSVILSLPSLKFLDVRFNKFHGDLPSSLFEKKLDALFINNNDFKFSLPENIGNSPVSVLVFANNNINGCLPSSLSNMNNTLEEIIITNSGLIGCLPPEIGSLSNLTVFDVSDNNLVGPLPETMAGMKKLEQLNIAHNQLSGEIPASVCLLPTLQNFTYSYNFFCSEPSMCLKLQASDDRKNCLPERPLQRSPEECKALYSYPVDCGVFGCTRRPPPPL 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8737566 8739775 + Carg06164-RA Car06g01193 150929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01193 363 Pfam Leucine rich repeat N-terminal domain 38 71 IPR013210 -
Car06g01193 363 MobiDBLite consensus disorder prediction 1 25 - -
Car06g01193 363 Pfam Leucine rich repeat 225 284 IPR001611 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g01193 Car14g01568 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g01193 Car-Chr6:8737566 Car12g01214 Car-Chr12:11564190 1.14E-146 dispersed
Car14g01568 Car-Chr14:12812508 Car06g01193 Car-Chr6:8737566 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01193 - - cmos:111457817 637.876