Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01199 ATGGATTCGAGAGGAAACGAGGATAAATCGCTGAACTCGAAGGATGCTAGTATTGGAAGCATTAGCAGCAAAGATATGATATTTAGAGCAGATAAGATCGATTTGAAAAACCTGGATATGCAGCTGGAAAAGCACTTGAGCCGTGTTTGGTCGAAGAGCGTTGGCGTTGAGACACAAAAGCCTAAGGAGGAGTGGGAGATTGATTTGTCTAAACTCGATATTCGATATGTCGTCGCTCACGGGACTTACGGGACGGTGTTCAGGGGTACATATGACAATCAAGATGTCGCTGTGAAGCTATTGGACTGGGGGGAGGATGGTCTTGCCACATCTGCTGAAACTGCTGCTTTGCGTGCATCGTTTCAGCAAGAGGTTGCTGTCTGGCATAAGCTTGATCATCCTAATGTTACAAAATTTGTTGGAGCTTCAATGGGAGCTACAAATCTTAAGATTCCTTCAAATGGCTCTTCGATGGATGGTCAAAATTCCCTTCCATCTAGAGCCTGCTGTGTTGTTGTTGAGTATCTTCCTGGTGGGACATTAAAACAATACTTGATAAGGAACAGGAAAAAGAAGCTTGCCTTTAAGGTTGTGATTCAAATAGCTTTGCATCTCTCCAGAGGGCTTAGCTATCTACACTCCAAGAAGATTGTACACCGTGATGTCAAAACTGAAAATATGTTGTTAGATAGTCAAAGAACTCTAAAAATTGCTGATTTTGGGGTTGCCCGTGTCGAAGCTCAGAATCCAAGAGACATGACGGGGGAAACTGGTACTCTTGGATACATGGCCCCAGAGGTTCTTGATGGGAAGCCGTACAATAGAAGATGTGATGTCTACAGCTTTGGCATCTGCTTATGGGAAATTTACTGTTGTGATATGCCATACCCCGATCTTAGTTTTGCTGATGTCTCATCTGCTGTTGTTCGTCAGAACCTACGACCTGATATCCCAAAGTGCTGTCCTAGTTCTCTGGCTAATGTGATGAAGAAATGCTGGGATGGCAACCCATCCAAACGCCCTGAAATGGATGAGGTTGTCAAAATGTTGGAAGCCATTGATACAAGTAAAGGAGGTGGGATGGTTTCTGATGACCAAGTCTCTAGGTGCTTCTGTTTCGGTTCGCCCCGCGGTCCGTGA 1140 44.65 MDSRGNEDKSLNSKDASIGSISSKDMIFRADKIDLKNLDMQLEKHLSRVWSKSVGVETQKPKEEWEIDLSKLDIRYVVAHGTYGTVFRGTYDNQDVAVKLLDWGEDGLATSAETAALRASFQQEVAVWHKLDHPNVTKFVGASMGATNLKIPSNGSSMDGQNSLPSRACCVVVEYLPGGTLKQYLIRNRKKKLAFKVVIQIALHLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLRPDIPKCCPSSLANVMKKCWDGNPSKRPEMDEVVKMLEAIDTSKGGGMVSDDQVSRCFCFGSPRGP 379
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8767005 8769848 + Carg06158-RA Car06g01199 150935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01199 379 Pfam Protein tyrosine and serine/threonine kinase 76 350 IPR001245 GO:0004672|GO:0006468
Car06g01199 379 ProSiteProfiles Protein kinase domain profile. 72 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01199 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g01199 Car14g01563 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g01199 Car-Chr6:8767005 Car11g01379 Car-Chr11:11265175 0 dispersed
Car11g00101 Car-Chr11:579938 Car06g01199 Car-Chr6:8767005 8.30E-66 dispersed
Car14g01563 Car-Chr14:12783184 Car06g01199 Car-Chr6:8767005 3.43E-99 wgd
Car17g01130 Car-Chr17:8673176 Car06g01199 Car-Chr6:8767005 0 wgd
Car06g01199 Car-Chr6:8767005 Car08g00296 Car-Chr8:1895137 4.19E-33 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88955 PF07714 PK_Tyr_Ser-Thr 4.30E-60 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01199 - - jre:108989477 657.521