Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01236 ATGGGTATTTCATGGAGTAACAGAAGAAGAAACAATTATCTTCAAAACCCACCTCCGCCCTACCATTCTTCTTCCTCCTTCTATTACCCTTCTGAACCCACATCCCTTCCTCCGCCGCCGCAGACCCATCACTTCACCAATTCCCACCCTCCTCCGCCGCACAGCCACCCTTACACTCCAACTCCCCAGCCGATACCCTTGCCGCCGATTCCTCCTGCCCCTGCTCCTCACTCCTATTACTTTTCTGGTGGGTACAATTCGTGTAATTATGGGAACTCTTCGATGGGGCGTTTCAATTTCCACCCTCATTATGCCAATCAGAGTAATGGGTGGTCTCAATTTCGGCCGGTGATGGTGCCGCCGTTTCTTCCTCCACCGTCTTTGCCGTTTGTGGAGCATCGACAGGCGAAGAAGGTTAGGAATGATGTGAATGTGCATAAGGATACTTTGAGGATTGAGGTGGATGAGCAGAATCCTGATCAGCATTTGGTTTCTTTCGTGTTTGATGCGTTGTATGATGGAAGCATTACCATCCTATTTTTTGCCAAGGAAGAGCCCAACTGTAGGTTTGTTCCAATATATCCCGACGCCTTGAAGCCAGTAAAAATCCCATTTCAAAAGGGTCCTGCTCAGAAATTCTTTCAGCCTGTGGGAACTGGCTTTGACTTGGGATTTTTCGAGTTGGATGACCTCTCAAAACCTTCGCCTTCTGAAGACGTTTTCCCGCTCGTTATATCAGCTGAGACTTGCTCACCCTCTCAGTCCAACGATGAACGAATTGGTGAGCCTCAACCAGATAATTCACATATGCAAATCACTCAAGCTGTTCTGGAGAAGAAAAATGGCAATCCTTTCCAAGTTAAGGTGATCCGGCAACTACTATGGATTGATGGAATGCGTTATGAGTTGCGTGAGATATTCGGTATAGGGAGTTCGTCTTCAGAAGGTTTTGACAATAACGACTCCGGTAAGGAGTGTGTGATTTGCATGACCGAACCCAAGGATACTGCTGTATTACCATGTCGACATATGTGCATGTGCAGTGAGTGTGCCAAGGAACTGAAGCTTCAATCTAATAAATGTCCGATTTGTCGTCAACCGATCGAAGAACTTATAGAAATCAAGATAAATAATAGCAATCAGTGA 1146 46.25 MGISWSNRRRNNYLQNPPPPYHSSSSFYYPSEPTSLPPPPQTHHFTNSHPPPPHSHPYTPTPQPIPLPPIPPAPAPHSYYFSGGYNSCNYGNSSMGRFNFHPHYANQSNGWSQFRPVMVPPFLPPPSLPFVEHRQAKKVRNDVNVHKDTLRIEVDEQNPDQHLVSFVFDALYDGSITILFFAKEEPNCRFVPIYPDALKPVKIPFQKGPAQKFFQPVGTGFDLGFFELDDLSKPSPSEDVFPLVISAETCSPSQSNDERIGEPQPDNSHMQITQAVLEKKNGNPFQVKVIRQLLWIDGMRYELREIFGIGSSSSEGFDNNDSGKECVICMTEPKDTAVLPCRHMCMCSECAKELKLQSNKCPICRQPIEELIEIKINNSNQ 381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8939866 8943087 - Carg17399-RA Car06g01236 150972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01236 381 MobiDBLite consensus disorder prediction 32 69 - -
Car06g01236 381 MobiDBLite consensus disorder prediction 1 31 - -
Car06g01236 381 Pfam Zinc finger, C3HC4 type (RING finger) 324 370 - -
Car06g01236 381 MobiDBLite consensus disorder prediction 1 69 - -
Car06g01236 381 ProSiteProfiles Zinc finger RING-type profile. 326 365 IPR001841 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g01236 Car14g01510 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00323 Car-Chr6:1772427 Car06g01236 Car-Chr6:8939866 1.78E-93 dispersed
Car06g01236 Car-Chr6:8939866 Car14g00184 Car-Chr14:866721 5.96E-97 dispersed
Car14g01510 Car-Chr14:12461213 Car06g01236 Car-Chr6:8939866 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01236 - - csv:101203938 634.795