Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01263 ATGGGCTGCGTTTTTGGGCGAGAGGTTTCTGCGAAGCCCGTTCAGAGACCGAACGCCGATGACGAAATTAGGGCTTCTGCCAAGGCGGAGGTTCCTGAGATTCGAGATGATGCTGCCGTTAATGTCCGCAATGGCGGAAGTAGGAACGAGGTTGATGATGATAGAGGTTCGAGGCCGAGGCGGCGATCGTCGAGGCCGAATCCGAGATTGAGTAATCCGCCGAAGCATGGCGAGCAAGTCGCCGCTGGTTGGCCGTCTTGGCTCTCCGCCGTCGCCGGTGAAGCTATCAATGGATGGATTCCTCGCCGTGCTGATAGTTTCGAGAAGCTTGATAAAATTGGGCAAGGGACGTATAGTAATGTGTACAAAGCCAGGGACTCTTTGACAGGGAAGATTGTGGCTCTGAAGAAGGTTCGTTTCGACAATTTGGAGCCCGAGAGCGTCAAATTTATGGCCCGGGAAATTCTCATTCTGCGGCGTTTGGATCATCCAAATGTCGTTAAACTCGAAGGTTTGGTGACGTCCCGGATGTCGTGTAGTTTATATCTTGTATTTGAATACATGGAGCACGATCTGGCTGGACTTGCTGCGAGCCCCGGGATCAAGTTTACGGAATCGCAGGTGCGAAGCTACTCGACGAAGTTCTTTGCTATCTGGCTTGAACATTGTCACAACCGTCACGTGCTGCATCGTGATATAAAGGGATCGAATCTTCTGATCGATAACGATGGGATCCTTAGGATAGCTGATTTCGGTTTGGCGTCTGTCTTTGATCCTAACCACAAGCATCCGATGACAAGTAGGGTGGTTACGCTATGGTATCGACCTCCTGAACTTCTTCTTGGAGCTACTGATTATGGTGTCGGTGTAGACCTCTGGAGTGCTGGCTGCATTTTAGCCGAGCTGTTAGCTGGAAAGCCTATCATGCCCGGTCGCACCGAGGTTGAGCAGCTGCATAAGATATTCAAGTTATGTGGCTCTCCTACAGAAGAATACTGGAAAAAGTCGAGGTTGCCTCATGCAACCATATTCAAGCCTCAACATTCATACAAGAGATGCATAGCAGAGACGTTTAAAGACTTCCCGCCGTCATCTCTGCCACTAATCGAGACGCTTCTCGCCATCGACCCCGCTGAACGCCTAACTGCCACGGCTGCTTTACATAGTGAATTTTTCACTACAAAGCCATATGCTTGTGAGCCTTCCAGTCTTCCTAAGTATCCTCCAAGCAAGGAAATGGATGCAAAACTACGGGACGAAGAAGCTAGAAGGCTAAGAGCTGTTGGCAGAAGCAATGCAGATGGAGTGAAGAGAACACGGGCACGCGATCGAGCTGTTCGGGCAATTCCTGCTCCAGAAGCCAATGCTGAGCTTCAAGCCAATCTCGATAGACGACGTCTCATAACACACGCAAATGCGAAGAGCAAGAGTGAAAAGTTTCCTCCTCCACATCAAGACGGAGCGATTGGCTACCAACTGGGATCTTCGCATCACGTCGATCCGATCTATGATCCTCCCGACGTTCCATTTAGCACCATGAATTTCTCGTATCCAAAAGCAAGCATCCAAACATGGTCTGGTCCCTTGATGGACCCAGGTGCTGTTGGTGCTCCTCCAAGAAGGAGAAAACACACCGCAGGTCATTCATCAAGATCATCATCCAAGGACTTGAATAAGGATAAAAATTCTGCTCGTATCTAA 1701 49.68 MGCVFGREVSAKPVQRPNADDEIRASAKAEVPEIRDDAAVNVRNGGSRNEVDDDRGSRPRRRSSRPNPRLSNPPKHGEQVAAGWPSWLSAVAGEAINGWIPRRADSFEKLDKIGQGTYSNVYKARDSLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLAASPGIKFTESQVRSYSTKFFAIWLEHCHNRHVLHRDIKGSNLLIDNDGILRIADFGLASVFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPTEEYWKKSRLPHATIFKPQHSYKRCIAETFKDFPPSSLPLIETLLAIDPAERLTATAALHSEFFTTKPYACEPSSLPKYPPSKEMDAKLRDEEARRLRAVGRSNADGVKRTRARDRAVRAIPAPEANAELQANLDRRRLITHANAKSKSEKFPPPHQDGAIGYQLGSSHHVDPIYDPPDVPFSTMNFSYPKASIQTWSGPLMDPGAVGAPPRRRKHTAGHSSRSSSKDLNKDKNSARI 566
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 9077875 9081137 - Carg17370-RA Car06g01263 150999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01263 566 ProSiteProfiles Protein kinase domain profile. 107 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01263 566 MobiDBLite consensus disorder prediction 14 37 - -
Car06g01263 566 MobiDBLite consensus disorder prediction 523 566 - -
Car06g01263 566 ProSitePatterns Protein kinases ATP-binding region signature. 113 136 IPR017441 GO:0005524
Car06g01263 566 Pfam Protein kinase domain 107 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01263 566 MobiDBLite consensus disorder prediction 472 493 - -
Car06g01263 566 MobiDBLite consensus disorder prediction 549 566 - -
Car06g01263 566 MobiDBLite consensus disorder prediction 47 61 - -
Car06g01263 566 MobiDBLite consensus disorder prediction 1 79 - -
Car06g01263 566 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g01263 Car14g01474 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g01263 Car-Chr6:9077875 Car10g00947 Car-Chr10:8002534 0 dispersed
Car18g00245 Car-Chr18:1415922 Car06g01263 Car-Chr6:9077875 3.13E-71 dispersed
Car14g01474 Car-Chr14:12256152 Car06g01263 Car-Chr6:9077875 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88956 PF00069 Pkinase 6.20E-64 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01263 K08819 - csv:101217952 969.533