Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01315 ATGGCGTTCAACTTCTGGGTCACCGCCACCGTCGATCTGCTCCTCCTCCTGATCTTCACGGTGATACCCTTTTCGATTTGTCAGCCAACTGACCAAGCTCCGCCTCCCTCCGCCGATTCTTGCAATAGTATCTTCTTGTCCTATAGTTTCAACCAAGGAACGAAGCTCCCCCCTAATGTCACTGATCGGACCCGTCAGCCGTACCGATTCGAGTCCACTCTCTTGATTCTCAATAACGGCCTTCAGGAGCTTAAGTCTTGGAAGGTTTTTGTGGGGTTTCAGCACGATGAGTTCTTGGTCTCGGCTTCCGGCGCCGTCCTTGCCGATGGGAATAGCGTTCCCGGAAACGTCGGCAATGGGACCGTCTTTGCTGGTTTTCCGATGACCGATTTGAAGACGGCGATTGAAACTGCTGGAGACTTCACTCAGATGCAGGTCCAAGTCAAATTGGTTGGGACCCAATTTGGGGTTGCCCCTCCGAATAGTCCGATGCCTACGAATATATCTCTTGCCAATGATGGATACCTCTGCCCTCGGCCAACTCTACTAGGAAAGAGTGAGATGCACGTCTGTTGTAGACCCGATCCAAGCGTTAAAACAAACATCACAACTAGTGAAGAGTTCTTGCCTCGCCAAAATGGCGATCTAACGATCATGTATGATGTGACAAGAACCTATGATTCGAGTTATTGGGCACAAGTCAAAATTTCTAACCATAATCCTCTCGGTCGTCTTGATTATTGGAAGTTGAGCTGGGAATGGATGAAGGATGAGTTCATCTATTCAATGAAAGGTGCTTATCCTTCTGTTGTTGATTCTACTGATTGCATTTTTGGTAGACAAGGCACTTATTATAAGGATTTAGACTTTGCCAATGTATTAAGCTGTGCAAAAAAGCCAACAATTGTTGATTTGCCTCCAACTAAGGCCAACGACACTACGCTCGGGTTGATCCCGTTCTGTTGTCGAAACGGGACGATCTTGCCTTCTCATATGGACTCAAGCAAGTCGATTTCAGCGTTTCAAATGCAAGTTTTTAAAATGCCACCAGATCTCAATAGATCCCAGATTACACCACCTCAGAATTGGAAGATCAGTGGCGTTCTAAACCCGACGTATAAATGTGGTGCTCCGTTGAGGGTAAGTCCTAGCGAATTCCCAGACTCGAGTGGTTTACCATTGAATTCGACTGCAGTGGCTAGTTGGCAAGTTGTTTGTAACATAACTCACGTCAAGGACGACACACCGAAATGCTGTGTTTCGTTTTCGGCTTACTACAACGATTCTGTCGTCCCTTGTCGAACGTGTGCTTGTGGATGCCCGCATAACACTGCTCGTACATGTAATGCAACGTCCTCTGCAATGCTCCTCCCACCGGAAGCCCTTCTTGTTCCGTTCGAGAATAGGACCGCCATGGCTGTGGCTTGGGCTGGTCTTAAACACTACCCAACTCCCAATCCCATGCCTTGTCCTGATAACTGTGGTGTGAGTATCAATTGGCATTTGTATACCGATTATAGAGACGGATGGAGTGCAAGGATTACTCTCTTCAACTGGGACGAAGTGAACTTTGCAGATTGGTTTGCTGCAGTTCAGATGAAGAAAGCAGCACCTGGTTTCCAGGCAATGTACTCGTTCAACGCGACGACCTTGGAACTGGATGGTGCCAATAATACTATCTTTATGCAGGGTAATCCTGGACTAAACTATCTCGTAGGCGAAACGGACGGAGTCCACCCAGAAAGGGATCCGAGGGTACCCGGAAAACAGCAATCTGTGATATCATTTACAAAGAAGAACATACAAGTTCTTAACATGGCTGCTGGAGATGGGTTCCCCACTAAAGTGTTCTTCAATGGGGAAGAATGTCTACTTCCAAAAACATTCCCTGTTAACGACAGCCGAAGGAACTTGGCTTCGTTGATTCCGAGCATCTTAACGCTACTATTCGTGTTCGTGTTTGTTCAGCAATAG 1974 47.06 MAFNFWVTATVDLLLLLIFTVIPFSICQPTDQAPPPSADSCNSIFLSYSFNQGTKLPPNVTDRTRQPYRFESTLLILNNGLQELKSWKVFVGFQHDEFLVSASGAVLADGNSVPGNVGNGTVFAGFPMTDLKTAIETAGDFTQMQVQVKLVGTQFGVAPPNSPMPTNISLANDGYLCPRPTLLGKSEMHVCCRPDPSVKTNITTSEEFLPRQNGDLTIMYDVTRTYDSSYWAQVKISNHNPLGRLDYWKLSWEWMKDEFIYSMKGAYPSVVDSTDCIFGRQGTYYKDLDFANVLSCAKKPTIVDLPPTKANDTTLGLIPFCCRNGTILPSHMDSSKSISAFQMQVFKMPPDLNRSQITPPQNWKISGVLNPTYKCGAPLRVSPSEFPDSSGLPLNSTAVASWQVVCNITHVKDDTPKCCVSFSAYYNDSVVPCRTCACGCPHNTARTCNATSSAMLLPPEALLVPFENRTAMAVAWAGLKHYPTPNPMPCPDNCGVSINWHLYTDYRDGWSARITLFNWDEVNFADWFAAVQMKKAAPGFQAMYSFNATTLELDGANNTIFMQGNPGLNYLVGETDGVHPERDPRVPGKQQSVISFTKKNIQVLNMAAGDGFPTKVFFNGEECLLPKTFPVNDSRRNLASLIPSILTLLFVFVFVQQ 657
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 9408958 9411840 - Carg23747-RA Car06g01315 151051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01315 657 Pfam COBRA-like protein 230 409 IPR006918 GO:0010215|GO:0031225
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g01315 Car14g01418 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00880 Car-Chr4:5071120 Car06g01315 Car-Chr6:9408958 0 dispersed
Car06g01315 Car-Chr6:9408958 Car16g00854 Car-Chr16:6258208 0 dispersed
Car14g01418 Car-Chr14:11917877 Car06g01315 Car-Chr6:9408958 0 transposed
Car14g01416 Car-Chr14:11916014 Car06g01315 Car-Chr6:9408958 2.74E-92 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01315 - - csv:101209258 1207.59