Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01335 ATGGGGTCGGCTACTTCTACCGGAATTTACTCTCAAACGGTGTTTTCCGACGAGTTTCCGGTGGGTGGTTCGGGTTTTTCCGGTGTGTTCGACCTGCCATGTGATGATGATCATAAAGCTTCTTGTTCTTCTTCTTCTTCTTTTGACTTGTTTGGTGGTGGGATTGGATTCCATGATTTCTATAATCCTTCTTCTATGTTCGATTTGCTTTCTACTACCACTCCGCCCCTTCAGCCGCCGCTTTCCTCGCCGTCCTCCACCGTCCCGGAGTCCTCCGAGGTGCTTAATGCTCCAACGACGCCTAATTCTTCCTCCGTTTCTAATTCCTCCTCCAATGAAGCTGCTCCTATCGAAGAGGTTGACAGGAACGCCAAGACTTCCAAAGTGTTGAAGCCAAAGAAGAACCAGAAGAAGCAAAGAGAACCGAGATTTGCTTTCATGACAAAGAGTGATATCGATCATCTCGACGACGGTTACCGGTGGCGGAAGTACGGTCAAAAGGCCGTGAAGAACAGTCCTTATCCTAGAAGCTATTATCGTTGCACGACGTCACAATGCGGTGTGAAAAAGAGGGTGGAACGGTCATCGAGCGACCATTCAATCGTCATCACAACGTACGAAGGCCAACACACCCACCAAAGTCCGGTAATGCCACGAGGAAGCATTCGGATCCTATCGGAATCCACCAATTGCCTCGTTGCCGATCACGACGTTGTCACCACCGGAATTCTATTCCAACCCGGCCAACCCTTTATGTATAACCCTCCGCAACCGTTTCTAACAAACGACTCATCGTTCTTGAGTCCTCGTCCTCCTCCGTCTTCCCTTCCACCGCCATCGTTGTCGTCTCGAGCTTCCTTGCTTCAGGACAATGGGCTTCTGCAGGACTTGGTGCCATTGCAAGTGAGGAAGGAACCAAAAGATGAACAAAATGGATGA 939 49.63 MGSATSTGIYSQTVFSDEFPVGGSGFSGVFDLPCDDDHKASCSSSSSFDLFGGGIGFHDFYNPSSMFDLLSTTTPPLQPPLSSPSSTVPESSEVLNAPTTPNSSSVSNSSSNEAAPIEEVDRNAKTSKVLKPKKNQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTSQCGVKKRVERSSSDHSIVITTYEGQHTHQSPVMPRGSIRILSESTNCLVADHDVVTTGILFQPGQPFMYNPPQPFLTNDSSFLSPRPPPSSLPPPSLSSRASLLQDNGLLQDLVPLQVRKEPKDEQNG 312
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 9575672 9577062 + Carg25644-RA Car06g01335 151071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01335 312 MobiDBLite consensus disorder prediction 84 116 - -
Car06g01335 312 Pfam WRKY DNA -binding domain 156 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car06g01335 312 MobiDBLite consensus disorder prediction 262 288 - -
Car06g01335 312 MobiDBLite consensus disorder prediction 71 144 - -
Car06g01335 312 ProSiteProfiles WRKY domain profile. 150 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g01335 Car17g00350 CCT
Car06g01335 Car17g00350 ECH
Car06g01335 Car14g01391 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g01335 Car-Chr6:9575672 Car19g00856 Car-Chr19:8938314 2.00E-45 dispersed
Car20g00226 Car-Chr20:1304429 Car06g01335 Car-Chr6:9575672 5.13E-39 dispersed
Car14g01391 Car-Chr14:11753466 Car06g01335 Car-Chr6:9575672 1.17E-108 wgd
Car17g00350 Car-Chr17:2214403 Car06g01335 Car-Chr6:9575672 3.27E-59 wgd
Car06g01335 Car-Chr6:9575672 Car08g01156 Car-Chr8:7759904 2.52E-47 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3756 PF03106 WRKY 1.70E-25 CL0274 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01335 - - bhj:120088001 337.035