Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01352 ATGAGAGTTGGGAAGTATGAGTTGGGGAAAACTCTGGGGGAAGGAAATTTCGGCAAGGTAAAGTTGGCCGTCGATCTCCGTTCTGGCCGCCGTTATGCTGTCAAGATCCTTGACAAGACCAAGATTCTTCATCTCAACTTCTCTGATCAGATTAAGCGTGAAATAAGTACTCTCAAGCTTCTTAGACATCCGAATGTTGTTAGACTCTATGAGGTTTTAGCTAGTAAGACGAAGATTTATATGGTTATGGAGTGCGTCACTGGTGGGGAATTGTTTGATAGAATCGAATCAAAAGGTAAGTTGGATGAAGCTGAAGGACGACGACTCTTCCAGCAGCTTTTTGATGGTCTAAGCTACTGCCATGATAAAGGAGTTTACCACAGAGATCTCAAGCTGGAAAACGTGCTTGTTGATGATAAGGGAAACATTAAGATTTCTGATTTTGGCCTCAGTGCTTTACCGCAGAATTGCAGGGAAGATGGTTTGCTGCACACCACCTGTGGAAGTCCCAACTATGTTGCACCAGAAGTACTTGCTAATAGAGGATACAATGGAGCTGCCTCTGATATATGGTCATGTGGGGTTATCTTGTATGTGATTCTTACAGCTTGTCTTCCATTTGACGAGACGAATCTGGCTCTACTTTATAAAAAGACTTTGAGGGGGGATTTTCAGCTACCCAAATGGTTATCAGCAGGTGCCAGAAATTTGATAAAGAGAACTCTTGACCCCAATCCCAATACTCGGATTACAATGGCAGGAATTAAAAAGGATGAATGGTTCAAGATTGACTATAATCCTGCTTCTCCTTGTTATGATGATGATGATGAGGATGAGGATATGCCATTCACTGATCAGGACGATGCCATCTCGGCGCACGATGAGGCATTTGACGGTGAAAACAGCCCAGAATCTCCCTCTATTATCAACGCGTTTGAGTTAATTGGGATGTCTTCAAGTCTGGACCTGTCCGGCTTCTTTGAGCAAGAGGATGTTTCTGAGAGGAAGACCAGATTTACATCCAACCATTCTGCGAAGGACTTGCTCGAGAGGATCGAGATTATAGCAACGGATATGGGATTCCGGGTCCAAAAGAAAAGTGGAAAGTTGAAAGTAATGCAAGAGATAAGAAATCAAAGAAGCCTAAGCAATCTCTCATTCAAAGCAGAGGTCTTTGAGATTAGCCCATTGCTTAACGTAGTGGAACTGAAGAAATCCTTTGGAGATTCCTCAGCTTACAGACAGTTGTGTGAAAGGCTATCAAATGATTTGGGCACAAACCCCGAGCTCGAACGGCATAATTCGAGTTCATTCACGTTAAATAGTACATGTTAG 1335 43.0 MRVGKYELGKTLGEGNFGKVKLAVDLRSGRRYAVKILDKTKILHLNFSDQIKREISTLKLLRHPNVVRLYEVLASKTKIYMVMECVTGGELFDRIESKGKLDEAEGRRLFQQLFDGLSYCHDKGVYHRDLKLENVLVDDKGNIKISDFGLSALPQNCREDGLLHTTCGSPNYVAPEVLANRGYNGAASDIWSCGVILYVILTACLPFDETNLALLYKKTLRGDFQLPKWLSAGARNLIKRTLDPNPNTRITMAGIKKDEWFKIDYNPASPCYDDDDEDEDMPFTDQDDAISAHDEAFDGENSPESPSIINAFELIGMSSSLDLSGFFEQEDVSERKTRFTSNHSAKDLLERIEIIATDMGFRVQKKSGKLKVMQEIRNQRSLSNLSFKAEVFEISPLLNVVELKKSFGDSSAYRQLCERLSNDLGTNPELERHNSSSFTLNSTC 444
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 9681729 9684850 + Carg25661-RA Car06g01352 151088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01352 444 ProSiteProfiles Protein kinase domain profile. 6 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01352 444 ProSitePatterns Protein kinases ATP-binding region signature. 12 35 IPR017441 GO:0005524
Car06g01352 444 Pfam NAF domain 306 365 IPR004041 GO:0007165
Car06g01352 444 Pfam Protein kinase domain 6 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01352 444 ProSiteProfiles NAF domain profile. 304 328 IPR018451 GO:0007165
Car06g01352 444 MobiDBLite consensus disorder prediction 424 444 - -
Car06g01352 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g01352 Car-Chr6:9681729 Car02g00982 Car-Chr2:6959053 2.06E-151 dispersed
Car14g01370 Car-Chr14:11579298 Car06g01352 Car-Chr6:9681729 0 wgd
Car17g00372 Car-Chr17:2376557 Car06g01352 Car-Chr6:9681729 5.46E-151 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88958 PF00069 Pkinase 1.60E-72 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01352 K07198 - csv:101205987 793.497