Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01399 ATGTTCTTGAAGAAGATGAGTGGTTGGAGAGGTGGATTGTTTGTGGAATTGGTTGTTTTTGCAGATATGTGTCTGATGGTGTCTGGTTTAGGCTCTATGGCTTCTGTGGCTGTTTCTTATGGCGAGAAAGGGCCTGTTTTCTGTGGTTTAATGGCAGATGGGTCTCATCTCGTGAGCTGTTTTGGTTCAAATTCAGCCATAACTTACGGAACTCCTTCTCATTTCCCCTTCATTGGTCTCACTGCTGGTGATGGTTTTGTTTGTGGGCTTCTTTTGGATTCCAACCAGCCTTACTGTTGGGGAAGCAGTGGCTATGTTCAAATGGGTGTTCCTCAGCCCATGATCAAAGCCGCTCAATACCAGGAAATCAGTGCTGGTGATTACCATCTCTGTGGCCTCCGAACACCGCTAACTGGAAGGCATAGGAACAACACGTCTTTTGTTGATTGTTGGGGTTACAACATGACAAGAACCTTTGTGTTTGATGGCCCGATTGAATCGATCTCGGCAGGGTCTGAGTTCAACTGTGGGCTGTTTTCTCTTAATAGAACTGTTTTGTGTTGGGGCGATGAGACGAGCAGCCGGGTCATCAGTTTGATACCTAAAGATATGAGGTTTCTAAAGATTGCTGCTGGTGGATATCATGTTTGTGGGATTCTAGAGGGCATTAAGGCGAGGGCGTTCTGTTGGGGAAGGAGCTTAGACATTGAAGGAAGTGCAGACTTGGTTCCAGTTGATCCATTAGACTCTGTTGTTGGGGGCAAGTTTCATGCTTGTGGGATCAAGAGCATGGACCGTGGTGTGATTTGTTGGGGCTTTACAGTCAAACCAAGCACTCCAGCGCCGGATGGGATTAAGGTTTATGACATAGCAGCTGGAGATTACTTCACTTGTGGAATTCTAGCTGAGAAATCTCTCCTGCCTGTTTGCTGGGGTCTTGGATTTCCTAGTTCTATACCCTTAGCTGTGTCGCCTGGAGTCTGTAAAGCAACTCCTTGTGCTCCTGGTTTCTATGAACTAAGCCAAGACAGCGCTCGGTGCAAGTCGCCGAGTTTTCGTGTGTGTATGCCCTGCAGTACTACATGCCCTCCTGAGATGTACCAAAAATTTGAATGCTCCTTAAAATCTGATAGACAATGTGAATATAACTGTTCAAGTTGTTTTTCTTCGGAGTGTTCATCAAACTGTTCATCCATTAGTTCAAATGGCTTGATGGGGAAGAAAAATGAGAAGTTGTGGTCAATGCAGCTTCCAGCTCTGGTAGCAGAGGTTGCTTTTGCTCTGTTTTTGGTAGCTATTGTGTCGCTAACTGCGATCTTATACGTTCGGTATAAGTTACGGAGCTTCCATTGTTCCGAAAAGGAGTTGAAGTCTAAGAAGAACCAAGGGACTGCCTCTTCCTTCCAGAAGGAAAGCTACAAAATACGTCCCGACTTAGATGAGCTAAAGATAATGAGGGCTCGGATGTTCACTTACGAAGAACTCGTGGGAGCGACGTGCGGGTTTAAGGAAGATTCAATGGTGGGAAAGGGAAGTTTCTCCTGTGTTTTCCGAGGTGTTTTAAACAACGGGACGGTTGTAGCAGTGAAACGAGCTATAATGTCTCACAACAAGCAGAAGAATTCAAAAGAGTTTCACACTGAACTTGACTTGCTGTCAAGATTAAACCATGCTCATTTGCTTAATCTACTTGGTTATTGTGAAGAAGGTGGAGAGAGGCTTCTAGTTTATGAGTTCATGGCTCATGGTTCCTTATATCAGCACCTTCATGGCAAGAACAAGGCCTTGAAAGAGCAACTAGATTGGATAAGAAGGGTCACCATTGCAGTCCAAGCAGCAAGGGGAATTGAATACTTGCACGGCTATGCTTGTCCTCCCGTCATCCATCGGGACATCAAATCGTCAAACATTCTTATTGACGAGGAGCATAACGCTCGAGTAGCCGATTTTGGCTTGTCGTTGTTAGGGCCAGCGGATGGCAGCTCTCCATTAGCAGAGCTACCAGCCGGAACTCTTGGCTATCTTGATCCTGAATACTACAGACTTCACTACCTTACAACCAAGTCTGATGTCTATAGCTTTGGTGTTTTGCTACTCGAAATTCTCAGCGGTAGAAGAGCCATTGATATGCAATATGAAGAAGGGAACATAGTAGAATGGGCAGTGCCATTGATCAAATCTGGAGATATCTCTGCAGTTTTAGATCCGATACTAAAACCGCCATCCGATATCGAGGCCTTGAAGAGGATAGCAAACGTAGCTTGTACATGTGTGAGAATGAGGGCGAAGGAGAGGCCATCAATGGACAAAGTCACGACGGCATTGGAACGTGCTCTTGCCCAGTTAATGGGAAGTCCATATAATGAACAACCAATCTTACCAACGGAGGTGGTTTTAGGAAGCAGTAGACTGCATAAAAAGTCATCTCAAAGATCATTGAACCATTCTGTCTCCGAAACGGATATAGCAGAATCTGAGGATCAAAGGTTCGAGTTCAGAGCTCCATCGTGGATTACGTTCCCGAGCGTGACGTCGTCCCAGCGGAGGAAATCCTCAGCTTCGGAAGCAGATGTTGATGGAAAGAATTTAGAAGGAAGAAATGGGGATGGATTGAAGAGTTTAGAGGAAGAGATTGAGCCTGCTTCCCCTCAGGAAAAGCTGTTCTTGGAGCACAATTTCTAA 2682 45.41 MFLKKMSGWRGGLFVELVVFADMCLMVSGLGSMASVAVSYGEKGPVFCGLMADGSHLVSCFGSNSAITYGTPSHFPFIGLTAGDGFVCGLLLDSNQPYCWGSSGYVQMGVPQPMIKAAQYQEISAGDYHLCGLRTPLTGRHRNNTSFVDCWGYNMTRTFVFDGPIESISAGSEFNCGLFSLNRTVLCWGDETSSRVISLIPKDMRFLKIAAGGYHVCGILEGIKARAFCWGRSLDIEGSADLVPVDPLDSVVGGKFHACGIKSMDRGVICWGFTVKPSTPAPDGIKVYDIAAGDYFTCGILAEKSLLPVCWGLGFPSSIPLAVSPGVCKATPCAPGFYELSQDSARCKSPSFRVCMPCSTTCPPEMYQKFECSLKSDRQCEYNCSSCFSSECSSNCSSISSNGLMGKKNEKLWSMQLPALVAEVAFALFLVAIVSLTAILYVRYKLRSFHCSEKELKSKKNQGTASSFQKESYKIRPDLDELKIMRARMFTYEELVGATCGFKEDSMVGKGSFSCVFRGVLNNGTVVAVKRAIMSHNKQKNSKEFHTELDLLSRLNHAHLLNLLGYCEEGGERLLVYEFMAHGSLYQHLHGKNKALKEQLDWIRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPADGSSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRRAIDMQYEEGNIVEWAVPLIKSGDISAVLDPILKPPSDIEALKRIANVACTCVRMRAKERPSMDKVTTALERALAQLMGSPYNEQPILPTEVVLGSSRLHKKSSQRSLNHSVSETDIAESEDQRFEFRAPSWITFPSVTSSQRRKSSASEADVDGKNLEGRNGDGLKSLEEEIEPASPQEKLFLEHNF 893
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 10049377 10052058 + Carg15477-RA Car06g01399 151135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01399 893 Gene3D Transferase(Phosphotransferase) domain 1 580 788 - -
Car06g01399 893 PANTHER RECEPTOR-LIKE KINASE 13 893 - -
Car06g01399 893 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 332 380 IPR001368 GO:0005515
Car06g01399 893 Pfam Protein tyrosine and serine/threonine kinase 505 774 IPR001245 GO:0004672|GO:0006468
Car06g01399 893 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 13 893 - -
Car06g01399 893 ProSitePatterns Serine/Threonine protein kinases active-site signature. 627 639 IPR008271 GO:0004672|GO:0006468
Car06g01399 893 ProSiteProfiles Protein kinase domain profile. 502 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01399 893 MobiDBLite consensus disorder prediction 852 893 - -
Car06g01399 893 CDD STKc_IRAK 508 777 - -
Car06g01399 893 Gene3D Phosphorylase Kinase; domain 1 472 579 - -
Car06g01399 893 ProSitePatterns Protein kinases ATP-binding region signature. 508 530 IPR017441 GO:0005524
Car06g01399 893 Gene3D - 157 324 IPR009091 -
Car06g01399 893 MobiDBLite consensus disorder prediction 843 893 - -
Car06g01399 893 SUPERFAMILY RCC1/BLIP-II 30 273 IPR009091 -
Car06g01399 893 SMART serkin_6 502 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01399 893 Gene3D - 27 156 IPR009091 -
Car06g01399 893 SUPERFAMILY Protein kinase-like (PK-like) 483 775 IPR011009 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g01399 Car14g01313 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g01399 Car-Chr6:10049377 Car09g01094 Car-Chr9:11105458 7.84E-95 dispersed
Car14g01313 Car-Chr14:11132889 Car06g01399 Car-Chr6:10049377 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88960 PF07714 PK_Tyr_Ser-Thr 1.40E-43 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01399 - - csv:101210393 1599.72