Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01414 ATGCTGATTTCTCGAGCTTCCGAGCCCACCGGAATCCATGGAAGTCATTTCCGGGAGGCGGGCATCTCCGGTGGGTTTCCGTTGTTTCCCGACGTGTCGGGGAGCTACATGTCTGTGGGTACGAGGAGTAGTATGAAGGAAGATATGGTTTCGGTTAGTAAAGGGTCAGCGGTGGAGGTGGTGGAGGGAGGAGCGGAGACGACGGAGATGGCGGCGGCGAGACAGGGAGATAATGATAAGAAAAAGAAGACGAGAAGCCGGAGATTTGCTTTTCAAACAAGGAGTCAAGTTGATATTCTTGATGATGGATATCGATGGAGAAAGTATGGACAGAAGGGTGTGAAGAACAACAAATTCCCAAGAAGCTACTATAAATGCACACACCAAGGGTGCAAGGTGAAGAAGCAAGTGCAAAGGCTAACAAGAGATGAAGGAGTGGTGGTGACAACTTACGAAGGCATTCACTCTCATCCCATTCAGAAATCCACAGATAACTTCGAGCATATTTTGACCCAGATGCAAATTTACACTTCTTATTGA 540 47.78 MLISRASEPTGIHGSHFREAGISGGFPLFPDVSGSYMSVGTRSSMKEDMVSVSKGSAVEVVEGGAETTEMAAARQGDNDKKKKTRSRRFAFQTRSQVDILDDGYRWRKYGQKGVKNNKFPRSYYKCTHQGCKVKKQVQRLTRDEGVVVTTYEGIHSHPIQKSTDNFEHILTQMQIYTSY 179
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 10118646 10119760 - Carg15462-RA Car06g01414 151150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01414 179 Pfam WRKY DNA -binding domain 101 158 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car06g01414 179 ProSiteProfiles WRKY domain profile. 95 160 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00667 Car-Chr4:3885633 Car06g01414 Car-Chr6:10118646 1.11E-37 dispersed
Car06g01414 Car-Chr6:10118646 Car14g00663 Car-Chr14:3662835 9.51E-59 dispersed
Car14g01287 Car-Chr14:10973869 Car06g01414 Car-Chr6:10118646 3.12E-71 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3765 PF03106 WRKY 3.70E-25 CL0274 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01414 - - cmo:103494564 222.631