Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car06g01442 | ATGGAAAACCCCTTTTCGTCCAAGGAGGAAGGGATGATGGGGTATTGGGGACCTTCCAGAACTCAGGCCGAAACTATGAATTCCACTGACGCTGGAATGAGGATTTTGAGTCCTGAAGATGTCCTCCCCACCTTCTCTGACATGATGAATTTTGATTCTTATGCGGCAATCGATCAGATTTTCACATCTTGTGGGTTTTCATCGATGCCCCAAATGAGTACTTGCGGTTCTATCGAGGGCTTGTCTTTTGTTGAAGGGGGGTGCCATGAAGGATTCCCTCTGAATGAACATGGTGGAGCTTCCATTTCCATGGCGAATTCTTTTACTTGTGGGGACAAGGTGATGTTTCAGCTGCCAGACACTGAATTTGGGGTGTCTAGTGTTTCGGACAACGCAAACAAAGTAGATTCTAAATCAAATGATGTCCCTGTAGACATGGATAGCTGTCTGATCTCTAGGCCGTTTGGTTGGTCACTTGATGAGAAAATGCTGAGGGTTTTATCCATGTTTAAAGAGTCATCACCTGGAGGTATTTTGGCTCAAGTCTGGGTTCCTGTGAAGCATGGAGACCAATTCTTCTTGAGCACCAGCGAGCAGCCATATTTGCTTGATCAAATGCTCACAGGGTACCGTGAAGTGTCGAGGTCGTTTAGATTCTCAGCAGAAGGAAAACTGGGTTCTCTCCTTGGGCTTCCTGGTCGTGTTTTCACCTCCAAACTCCCAGAATGGACATCAAATGTTAGATATTACAGTGACCACGAGTATCTGAGAATGCAACATGCAATCGGCCATGATGTTTATGGATCGATTGCCTTACCGGTATTCAATAACGAAGTCGAAAAATCATGCTGTGCCGTACTTGAAGTTGTTACTACAAAGGAGAAGCCCAATTTTGATGCAGAAATCGACATTGTTTCCCAAGCACTAGAGACTGTTAGCTTGAGCACTGTTCCGCCTCCTCGACTATATTCGCAGTGCTTGAAGAAGAACCAGAGAGCTGCATTGGCGGAGATAGTGGACGTGCTACGTGCTGTATGTCATGCACATAGACTACCTCTTGCCCTAACCTGGATTCCTTGTTGTTATTCTTTCGACGCCGTTGATGAGGTTGCAAGAGTTCGTGTTAAGGAGAACAACATTAACCCAGAGGAGAAATTTGTATTATGTATCGAGGAAACAGCATGTTATGTGAATGACAAATCAACTCAAGGATTTGTGCATGCTTGTCTGGAGCATCATCTTGAAGAAGGGCAAGGGATAGCTGGGAAAGCTCTTCAATCTAATCATCCCTTCTTTTATCCTGACGTGAAGGCATATGATATTAATAAATATCCGCTGGTCCATCACGCACGCAAGTTCGGTTTGAATGCTGCGGTTGCAATCAGGCTGAGAAGCATGTACACTGGCAACGATGATTATATACTCGAATTCTTTCTACCTGTCAATATGAAAGGAGCTGCAGAACAACAACTATTGTTAAACAATCTCTCTGTTACCATGCAAAGAATGTGCAGGAGTTTGAGGACAGTTTCAAAGGAAGAATTAATAGGGGCTGAGGATTCTGTTGTTGACTTTCAGAGTGGATTTACATCAATGAGAAACTCGCAATCCACGGCAACAGACAGTGAAACAAGGGTGTCTAACTCGATAAATAATGGAGCTGAAGCAGAATGTCCTGAGAAGCAGATGACTGATGGATCACGGAAGCAGGGCGAGAAAAAACGTAGCACATCCGAAAAAAACGTGAGCTTGAGTGTTCTACAGCAATATTTTTCTGGGAGTCTCAAGGATGCAGCAAAGAGCATTGGTGTTTGTCCAACAACGCTGAAAAGAATATGCAGACAACACGGGATTTTGAGGTGGCCGTCCCGTAAAATAAACAAGGTAAACCGTTCGTTAAGGAAAATACAGACGGTTCTTGATTCTGTGAAGGGGGTGGAGGGCGGCCTGAAGTTTGATCCAACTACAGGGTGTCTTATGGCTGGTTCTCTTATTCCAGAACTCAATGCACAAAATAGTCTTCTCTTCTCTGATAATAACCCAGCTATACCAAACCTTGACCCGTTCCTTCATGACGTAAATTCGGTTCCTTCTGCCCCTTTCAATACTCAGAATTCTGCCATCAAACTGGAAATGGACGAGTCTTCCGTTTCTATATCCCAAAGAACGTCATCGAGGAGTGTTCTCATTCCAGAGAAGGAACCGACCGTTCGCCATCGTGATTGTAGTGAAGGCTTGGAGGCCGCTGGTGTAGATGCTGCATCATGCCAGCTTGCTGATCTGGATATGGTGGGTTGGGATGTCCAAGGGAATGCCTCAGCTTCTATTGCTGCTAAAAAAAGTGACAGATTGGATTTTGTGAAGAACGATTTGAGGTCAGGAGATGCCGACTGCCAATTTATGGCCAAGAGCTCGATCTCTTTTGCAGCTGCTGATGAAGTCGGTACCGTGTTGAATGAACATTACCAGCCAACTACTTCGAGCATGACCGACTCATCAAATGGCTCTGGCTTAATGATTCATGGCAGTTCATCTAGCAGTCAGAGCGTCGAGAGGAAGCATTTGCCAGAAAAAGTTGGCTCGGTTGACAGCGAGTCCAAGATTATTGTAAAAGCTTCATACAAAGACGACACAGTTCGATTCAAGTTCGATCCTTGTTTAGGATATCTCCAGCTCTACGAAGAAGTAGGCACGCGATTCAAGCTAAACCAAGGAACATTTCAACTCAAATACCTAGACGATGAAAAAGAATGGGTGATGCTAGTAAGCAATTCAGACTTACAGGAATGTCTCGAGGTGATGGACGAAATCGGCACGAGAAATGTGAAGTTTCTCGTCCGTGATATCGCGTGTGCCGTGGGCAGTTCAGGTAGCAGTAGTTGCTTCCTATCTGGATGCATCCCTCCTACCCATTACCAGCGGCACCCCGAATCCTGCAGGTTGTTCCTGCCCGACGCTGTCTCAGCCGCCGCAGTCTGCACTCTCAGTCCTCCCGCTGCTATCTTCCTCTCCCTCTATTTCAGAAACTCAGTGGTTCAGCATTTTACCCGCGTCAGGGTTAATCTCTCACTATTCCAAGGAGGCTTTCATTTCGCCTTGGCTATGGGGAAGAAACGTAATAACGAGAAACATAAGGTAATTCTACCGCCGGACCTTCCACCAGAGGTTACCGAGGAAGAAATTGAGGTCTCCGATGAGGATTTGGAGTTTGTCAAGGAGAACCAGGACTATGCCGTCTCTGTTACTCGTCTAGACACTAAATCCATTACCAAGCATGTTACACGTGTTGCTAATGTTGAAGAAGATGCTTTGGAGGTTTTATACGAGAAGCGTCTGCGCAAGAAGCCACTGCCAAAACCGGAGGAGGAAAATAAGACCCAGGTTGATCGTGTGGATGCTCTTCCTGTCAAAACACTTGAGGGGGAACTTTACTACCGGACATCAAAAGCATCTGATGCACCTGAAGATGGTGGGAACGAAGAGGCAATGGAAGAGGACAGGGTAGATAATGGTGTATTGAAGTTAACTAAAGCAGAAAGGAGGGCAAAGCTGAAGAAAACTAAAAAGGTTGCCAAGAAACAAGAGGATGTAACCAAAGCTGAAGAAGTTAAACCAACCCCACAAGCAGCAGTTTTGGCGGAAGTGGTAGAAGATCTTACTGCTGAAAAGACATTTGAAAGTAAGAAGCAGAAACTTGCGGAGCTTGGAATTGCGTTGCTGGCAGACCCAAATTCCAATATTAAATCTCTGAAGGACATGCTACAGATTGTTAAGGATAATGATCAAGCAATTGTGAAACTTGGACTTCTATCATTATTGGCTGTTTTTAAAGACATTATACCTGGTTATCGGATTCGGCTTCCAACAGAAAAGGAGCTAGAAGTTAAAGTATCCAAGGATGTCAAGAAAATGCGGTACTATGAGTACACTCTTCTCACTACTTATAAGGGATACCTGCAGAAGCTGATGTCATTAGAGAAATCTACAGCATTTCAGCATATTGTTATTCGCTGTATCTGTACGTTGCTTGATGCAGTTCCCCACTTCAATTTTCGAGAGACATTGTTAGGCATTGTTGTTCAAAATATAAGCTCCCATGATGATGTTGTAAGAAAACTCTGTAGTGGTGCTATTAAGTCTTTATTTATCAATGAGGGAAAGCATGGTGGTGAGGCGACTGTGGAGGCTGTCCGGTTGATTGCTGATCATGTGAAATTTCATGACTGCCAATTGCATCCTGATTCCATCCAGCCTTTCATGCATCTAACATTTGACGAGGATCTGAGAAGAGCAGAAAAGCAAGATGAGCATAATAAAGTAAAGAACAAAAAACAATGGAAAAAAAAGAATCGTGAGGAAAAAAAGAATCGTGAGGAATCAAATCATTCGCAAGGGAATGATGGAAGACAAAGTACGAGGACAAAGTTTACTGAAGAGGTTGCTGCGGATTACAGGGCTGCTTCTCTTGCTCCAGATGTGATGAAGCAAAGAGAGATGCAGTCAGATACACTTCGTGCTGTATTTGAAACATATTTCCGAATCTTAAGGCATACAATGCAGTCATTAAAGGCTAGGCCTGAAGCAAATATTACTGCATCTACTACTAGCCCATCTGGATCCCATCCTCTGCTTGCTCCATGTTTGAATGGGTTGGGGAAATTTTCTCATCTGATCGATTTAGATTTCATGGGAGATCTTATGAATTATCTAAAAAGGCTTGCTTCTGGTGATGAGAAATCTTCTGAGAAACAGTCGCAATGTTTGACCGTTTCTGAGCGCCTTCAGTGTTGCATCGTGGCATTTAAAGTAATGAGGAAAAACCTTGATGCTTTGAATGTTGATCTTCAGGACTTTTTTGTCCAGCTGTACAATATTGTGCTCGAGTACAGGCCTGGAAGAGATCATGGTGGATTGTTAGCTGAAGCTTTGAAGATAATGTTGTGCGATGATAGACAGCATGACATGCAAAAGGCAGCTGCATTCATTAAGCGTTTGGCTACTTTCTCATTATGCTTTGGATCTGCAGAGTCGATGGCAGCCTTGGTCACCGTAAGGCATCTTCTTCTGAAAAATGTCAAGTGCCGCAACCTTTTGGAAAACGATGCTGGGGGAGGTTCAGTGTCTGGCTCAATAGCGAAATATCAACCATATGCTTCTGATCCAACATTGAGTGGCGCTCTTGCTTCTGTCCTTTGGGAACTTAATCTTCTGTGGAAGCATTATCATCCAACTATCTCAACGATGGCAGCGAGCATATCAAGCATGAATAATGCTCAAAACCAAGTTTATATCTCCACTGTTTCTCCCCAACAGGCATTCAAAGACTTGTCGCTGGAACAAGAGTCTTTCAACCCACAGTTTAATGTACGAAAAGTTAACAAGAAAAAAAGAGGCAGGGAATCATCCGAGCCTACTCCCGATACTTGCAGCGCCATCGACGAAAATGAAGTGAAAGAGAAACTTTCAACAAGATTCTTTCTTCTCCGGGACATCAAGGAGAATGAAAGACCTCCTTTGAGCGAGAGAGACTTTGATCTCTCCCTATTTCTGATGCAATTTCTCTGTTACTTCCATGGATTCCAAGCCTCCTCAGCCTTCAGAAGTTCGGTTTATTTTCAGTTTGCTGATTATGTGGCCATACTTTCTATTACTGCAGCTTCTAATCCTCCACCAAAACCTTGGGAACAAGTAGGGGGATCATCGGGTCCAGCACCGTTTAAACCCCCATCGGCTGGCAAAACAAGTGAGGTAGTTGAGGCTTCTGGGACTGCAAGACCTGGAGAAATCGTATCTGGTTCTGATAGGACTGCCACTGTTAATAGGAACTCACTTGGTAGGCCTGTTCCAACAAGACCTTGGGAGCAAAACTATGGGAATACCAGTTATGGAGGAGCATATGGTTCGACAATGAATAATTCACTTTATGGTTCTGGTATGTATGGTTCTTCGTCTTATGGCGGTGGAATGTATGGCGGTGGGATGTATGGGAACAGCATGTATAGAGGAGGTTATGGTGGAGGTTATGGATCTTCTGGTATGTATGGAGGTGGAATGTATAATAGTGGCTTTGGAGGTCCAATGGGTGGTTATGGAATGGGGATGGGTGGTCCTTATGGTGGTCAAGATCCAAATAACCCATATGGTCCTCCCTCATCTCCTCCAGGATTTTGGATGTCATTTCTGCGAGTGATGCACGGTGTTGTGAACTGCTTCGGTCGAATATCTGTTCTTATTGACCAAAACACACAGGCGTTCCATATGTTCATGTCTGCACTACTTCAGCTTTTCGATCGCTCGGGTATGTTATACGGAGAGCTTGCTAGATTTGTCTTAAGGCTGCTTGGGATTAAAACCAAACCTAGGAAAGTTGGACAAGTAGGCCCTGATGGGCTTCCTCTTCCTGGGGCACCCCATCCTCATCAAGGCCGGAACTTGCTCGAGGGACCACAGGCAGCTCCTGAAGGTTCATGGGATAATGTTTGGCCGAACGGTGGTCAGTAA | 6501 | 44.47 | MENPFSSKEEGMMGYWGPSRTQAETMNSTDAGMRILSPEDVLPTFSDMMNFDSYAAIDQIFTSCGFSSMPQMSTCGSIEGLSFVEGGCHEGFPLNEHGGASISMANSFTCGDKVMFQLPDTEFGVSSVSDNANKVDSKSNDVPVDMDSCLISRPFGWSLDEKMLRVLSMFKESSPGGILAQVWVPVKHGDQFFLSTSEQPYLLDQMLTGYREVSRSFRFSAEGKLGSLLGLPGRVFTSKLPEWTSNVRYYSDHEYLRMQHAIGHDVYGSIALPVFNNEVEKSCCAVLEVVTTKEKPNFDAEIDIVSQALETVSLSTVPPPRLYSQCLKKNQRAALAEIVDVLRAVCHAHRLPLALTWIPCCYSFDAVDEVARVRVKENNINPEEKFVLCIEETACYVNDKSTQGFVHACLEHHLEEGQGIAGKALQSNHPFFYPDVKAYDINKYPLVHHARKFGLNAAVAIRLRSMYTGNDDYILEFFLPVNMKGAAEQQLLLNNLSVTMQRMCRSLRTVSKEELIGAEDSVVDFQSGFTSMRNSQSTATDSETRVSNSINNGAEAECPEKQMTDGSRKQGEKKRSTSEKNVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGILRWPSRKINKVNRSLRKIQTVLDSVKGVEGGLKFDPTTGCLMAGSLIPELNAQNSLLFSDNNPAIPNLDPFLHDVNSVPSAPFNTQNSAIKLEMDESSVSISQRTSSRSVLIPEKEPTVRHRDCSEGLEAAGVDAASCQLADLDMVGWDVQGNASASIAAKKSDRLDFVKNDLRSGDADCQFMAKSSISFAAADEVGTVLNEHYQPTTSSMTDSSNGSGLMIHGSSSSSQSVERKHLPEKVGSVDSESKIIVKASYKDDTVRFKFDPCLGYLQLYEEVGTRFKLNQGTFQLKYLDDEKEWVMLVSNSDLQECLEVMDEIGTRNVKFLVRDIACAVGSSGSSSCFLSGCIPPTHYQRHPESCRLFLPDAVSAAAVCTLSPPAAIFLSLYFRNSVVQHFTRVRVNLSLFQGGFHFALAMGKKRNNEKHKVILPPDLPPEVTEEEIEVSDEDLEFVKENQDYAVSVTRLDTKSITKHVTRVANVEEDALEVLYEKRLRKKPLPKPEEENKTQVDRVDALPVKTLEGELYYRTSKASDAPEDGGNEEAMEEDRVDNGVLKLTKAERRAKLKKTKKVAKKQEDVTKAEEVKPTPQAAVLAEVVEDLTAEKTFESKKQKLAELGIALLADPNSNIKSLKDMLQIVKDNDQAIVKLGLLSLLAVFKDIIPGYRIRLPTEKELEVKVSKDVKKMRYYEYTLLTTYKGYLQKLMSLEKSTAFQHIVIRCICTLLDAVPHFNFRETLLGIVVQNISSHDDVVRKLCSGAIKSLFINEGKHGGEATVEAVRLIADHVKFHDCQLHPDSIQPFMHLTFDEDLRRAEKQDEHNKVKNKKQWKKKNREEKKNREESNHSQGNDGRQSTRTKFTEEVAADYRAASLAPDVMKQREMQSDTLRAVFETYFRILRHTMQSLKARPEANITASTTSPSGSHPLLAPCLNGLGKFSHLIDLDFMGDLMNYLKRLASGDEKSSEKQSQCLTVSERLQCCIVAFKVMRKNLDALNVDLQDFFVQLYNIVLEYRPGRDHGGLLAEALKIMLCDDRQHDMQKAAAFIKRLATFSLCFGSAESMAALVTVRHLLLKNVKCRNLLENDAGGGSVSGSIAKYQPYASDPTLSGALASVLWELNLLWKHYHPTISTMAASISSMNNAQNQVYISTVSPQQAFKDLSLEQESFNPQFNVRKVNKKKRGRESSEPTPDTCSAIDENEVKEKLSTRFFLLRDIKENERPPLSERDFDLSLFLMQFLCYFHGFQASSAFRSSVYFQFADYVAILSITAASNPPPKPWEQVGGSSGPAPFKPPSAGKTSEVVEASGTARPGEIVSGSDRTATVNRNSLGRPVPTRPWEQNYGNTSYGGAYGSTMNNSLYGSGMYGSSSYGGGMYGGGMYGNSMYRGGYGGGYGSSGMYGGGMYNSGFGGPMGGYGMGMGGPYGGQDPNNPYGPPSSPPGFWMSFLRVMHGVVNCFGRISVLIDQNTQAFHMFMSALLQLFDRSGMLYGELARFVLRLLGIKTKPRKVGQVGPDGLPLPGAPHPHQGRNLLEGPQAAPEGSWDNVWPNGGQ | 2166 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 10250361 | 10267098 | - | Carg15433-RA | Car06g01442 | 151178 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car06g01442 | 2166 | MobiDBLite | consensus disorder prediction | 1431 | 1474 | - | - | |
Car06g01442 | 2166 | MobiDBLite | consensus disorder prediction | 1889 | 1914 | - | - | |
Car06g01442 | 2166 | Pfam | RWP-RK domain | 581 | 629 | IPR003035 | - | |
Car06g01442 | 2166 | Pfam | PB1 domain | 870 | 947 | IPR000270 | GO:0005515 | |
Car06g01442 | 2166 | ProSiteProfiles | RWP-RK domain profile. | 568 | 649 | IPR003035 | - | |
Car06g01442 | 2166 | Pfam | Nucleolar complex-associated protein | 1228 | 1318 | IPR011501 | - | |
Car06g01442 | 2166 | MobiDBLite | consensus disorder prediction | 2122 | 2166 | - | - | |
Car06g01442 | 2166 | Pfam | CBF/Mak21 family | 1594 | 1749 | IPR005612 | - | |
Car06g01442 | 2166 | MobiDBLite | consensus disorder prediction | 532 | 555 | - | - | |
Car06g01442 | 2166 | MobiDBLite | consensus disorder prediction | 825 | 850 | - | - | |
Car06g01442 | 2166 | MobiDBLite | consensus disorder prediction | 532 | 580 | - | - | |
Car06g01442 | 2166 | ProSiteProfiles | PB1 domain profile. | 867 | 949 | IPR000270 | GO:0005515 | |
Car06g01442 | 2166 | MobiDBLite | consensus disorder prediction | 561 | 579 | - | - | |
Car06g01442 | 2166 | MobiDBLite | consensus disorder prediction | 825 | 851 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car06g01442 | Car-Chr6:10250361 | Car19g00869 | Car-Chr19:9039579 | 1.01E-26 | dispersed | |
Car18g01240 | Car-Chr18:11849431 | Car06g01442 | Car-Chr6:10250361 | 1.68E-08 | dispersed | |
Car14g01252 | Car-Chr14:10795346 | Car06g01442 | Car-Chr6:10250361 | 1.31E-41 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
3768 | PF03914 | CBF | 3.20E-22 | No_clan | Car | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car06g01442 | - | K14834 | csv:101222520 | 1542.71 |