Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car06g01490 | ATGGCTGGAGAAACTCCCGATGGAAACTCCGGCAATCCGCCGTCGGAGCTCGATTCCCCCACCACCTCTGCTGGTTTCGAAACCGACCAGCTTCCTCATCTCAGTCACATTTCCGACAACTACCCCGACGAGGACGAAGCTGCCGTTGATCCTCACATCGTTCACGACGAGCCTGATCCCGATGAAGAAGAGGAAGGAGAGGATCTCTACCACGACAATTTCCTGGACGATTATCGGAGGATGGACGACCATGACCAGTACGAGTCCTTGGGCCTCGACGATTCTTTAGAGGACGAGAGGGATTTGGATCAGATTATGGAGGACAGACGAGCTGCTGAGATGGAACTCGAGACTCGTGATGCTCAGTTCACCCGTCGGAAGCTTCCTGAGCTATTACACGACCATGACTCTGAGGATGACAATTACAGGCCTTCGAAAAGATCAAGAGCCGATTTTCGTCCTCCAGCTGCAGCAAGAAGCTACGATGACATTGATGGCATGCAAAGTTCTCCAGGTAGATCACAAAGGGAAAACTCACGAGATGATGTGCCCATGACTGATCATTCTGTTGATGACCAATATGAGGATGAAGATGATGATGAAAATGAGAATGAGATGTATCGTGTTCAAGGGCCACTTAGAGAGCATGTTACTATGGATGCAGTTCGGCGCTTTATAGGCAAAAAGTTTAAGAAATTCTTGGAAACATATGTGAATCCTAAGAGTGGAAATGGAGAGCTCGAGTACATGCGACTGATAAATGAGATGGTTTTAGCCAATAGGTGCAGTTTGGAGATTGATTACAAGCAGTTTATCTTTGTTCATCCAAATATTGCAATCTGGTTGGCTGATGCACCCCAATCCGTCTTAGAAGTTATGGAAGACGTTGCAAAGAAGGTTGTGTTTGACATACATCCGAACTACAAAAACATCCACCAAAAGATCTATGTTCGCATCAATAATTTACCAGTTTATGATCAGATTCGAAATATTAGGCAAATTCATTTAAATACCATGATTCGCATTGGTGGCGTAGTGACTCGGCGCTCTGGTGTGTTCCCCCAGTTGCAGCAGGTGAAGTATGATTGTAATAAATGTGGAACAATATTGGGACCATTCTTTCAGAATTCTTACTCGGAGGTCAAGGTTGGTTCTTGTCCCGAATGCCAGTCGAAGGGGCCATTTACAGTAAATGTCGAGCAGACTATATATAGGAACTACCAAAAGCTAACCCTCCAAGAAAGTCCAGGAATTGTGCCAGCTGGTCGACTCCCAAGGTATAAGGAAGTGATACTCTTGAATGATCTAATTGATTGTGCCCGTCCTGGGGAGGAAATTGAAGTCACTGGCATTTATACAAATAATTTTGACTTATCGTTGAATACAAAGAATGGTTTTCCTGTGTTCTCCACGGTTGTTGAAGCAAATTATGTTACCAAGAAGCAAGATCTCTTCTCTGCTTACAAGCTTACCCAGGAAGACAAAGAAGAGATTGAGAAGTTGGCTAAAGACCCTAGAATTGGAGAAAGGATAATCAAATCCATTGCCCCATCAATCTATGGTCACGAGGACATAAAAACAGCAATTGCTCTTGCAATGTTTGGAGGTCAAGAAAAAAATGTTGAAGGGAAACACCGGTTACGAGGTGATATCAATGTACTTTTACTAGGTGATCCTGGCACTGCCAAATCTCAATTTCTCAAGTATGTTGAGAAAACTGGGCATAGAGCAGTGTACACCACAGGGAAAGGAGCTTCAGCTGTAGGACTAACAGCAGCAGTGCACAAGGATCCTGTCACAAGGGAGTGGACCCTTGAAGGTGGTGCCCTTGTATTAGCCGATAGAGGAATTTGTCTGATTGATGAGTTTGACAAAATGAATGATCAGGACAGGGTGAGTATACATGAAGCAATGGAGCAGCAAAGCATTAGCATATCAAAAGCTGGAATTGTCACTTCTCTTCAAGCCAGATGCTCTGTCATTGCAGCTGCCAATCCCGTTGGAGGAAGGTACGACTCCTCAAAAACATTTTCACAAAATGTGGAGCTGACAGATCCTATCATTTCTCGATTTGACATCCTCTGCGTTGTTAAGGATGTGGTAGACTCTGTAACAGATGAGATGCTTGCTAAGTTTGTTGTTGATAGTCATTTCAAATCACAGCCGAAGGGCGGTAATATTGATGATAAGTCTGTAAATGAATCTCAAGAGGACAGTCAAGACTCTACAAGGCCACTGGATCCGGAGGTGCTTCCCCAAGATCTGCTGAAGAAGTACATAACTTATGCTAAGTTGAATGTTTTTCCAAGGTTGCATGATGCTGATATGGATAAGTTAACACATGTCTACGCAGAATTACGAAGGGAATCTTCTCATGGGCAAGGAGTTCCTATTGCAGTTAGGCACATAGAGTCAATGATACGCATGTCTGAAGCACATGCAAGAATGCACCTTAGGCAGCACGTCACACAAGAAGATGTTGATATGGCAATTCGTGTGTTACTTGATTCTTTCATTTCGACCCAAAAATTTGGGGTACAGAAAGCTCTGCAAAAGGTATTAAAGGAGATCACTATTTTCTCTCTCTAG | 2589 | 43.76 | MAGETPDGNSGNPPSELDSPTTSAGFETDQLPHLSHISDNYPDEDEAAVDPHIVHDEPDPDEEEEGEDLYHDNFLDDYRRMDDHDQYESLGLDDSLEDERDLDQIMEDRRAAEMELETRDAQFTRRKLPELLHDHDSEDDNYRPSKRSRADFRPPAAARSYDDIDGMQSSPGRSQRENSRDDVPMTDHSVDDQYEDEDDDENENEMYRVQGPLREHVTMDAVRRFIGKKFKKFLETYVNPKSGNGELEYMRLINEMVLANRCSLEIDYKQFIFVHPNIAIWLADAPQSVLEVMEDVAKKVVFDIHPNYKNIHQKIYVRINNLPVYDQIRNIRQIHLNTMIRIGGVVTRRSGVFPQLQQVKYDCNKCGTILGPFFQNSYSEVKVGSCPECQSKGPFTVNVEQTIYRNYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVTGIYTNNFDLSLNTKNGFPVFSTVVEANYVTKKQDLFSAYKLTQEDKEEIEKLAKDPRIGERIIKSIAPSIYGHEDIKTAIALAMFGGQEKNVEGKHRLRGDINVLLLGDPGTAKSQFLKYVEKTGHRAVYTTGKGASAVGLTAAVHKDPVTREWTLEGGALVLADRGICLIDEFDKMNDQDRVSIHEAMEQQSISISKAGIVTSLQARCSVIAAANPVGGRYDSSKTFSQNVELTDPIISRFDILCVVKDVVDSVTDEMLAKFVVDSHFKSQPKGGNIDDKSVNESQEDSQDSTRPLDPEVLPQDLLKKYITYAKLNVFPRLHDADMDKLTHVYAELRRESSHGQGVPIAVRHIESMIRMSEAHARMHLRQHVTQEDVDMAIRVLLDSFISTQKFGVQKALQKVLKEITIFSL | 862 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 10509629 | 10514229 | - | Carg23318-RA | Car06g01490 | 151226 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car06g01490 | 862 | CDD | AAA | 552 | 693 | - | - | |
Car06g01490 | 862 | MobiDBLite | consensus disorder prediction | 72 | 93 | - | - | |
Car06g01490 | 862 | Pfam | MCM P-loop domain | 495 | 717 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Car06g01490 | 862 | Pfam | Mini-chromosome maintenance protein 2 | 44 | 199 | IPR008045 | GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775 | |
Car06g01490 | 862 | ProSiteProfiles | MCM family domain profile. | 507 | 713 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Car06g01490 | 862 | Pfam | MCM AAA-lid domain | 754 | 838 | IPR041562 | - | |
Car06g01490 | 862 | ProSitePatterns | MCM family signature. | 616 | 624 | IPR018525 | GO:0003677|GO:0005524|GO:0006260 | |
Car06g01490 | 862 | MobiDBLite | consensus disorder prediction | 57 | 71 | - | - | |
Car06g01490 | 862 | MobiDBLite | consensus disorder prediction | 38 | 56 | - | - | |
Car06g01490 | 862 | MobiDBLite | consensus disorder prediction | 1 | 203 | - | - | |
Car06g01490 | 862 | MobiDBLite | consensus disorder prediction | 723 | 748 | - | - | |
Car06g01490 | 862 | MobiDBLite | consensus disorder prediction | 730 | 744 | - | - | |
Car06g01490 | 862 | MobiDBLite | consensus disorder prediction | 8 | 35 | - | - | |
Car06g01490 | 862 | Pfam | MCM OB domain | 327 | 454 | IPR033762 | - | |
Car06g01490 | 862 | Pfam | MCM N-terminal domain | 228 | 321 | IPR027925 | - | |
Car06g01490 | 862 | MobiDBLite | consensus disorder prediction | 175 | 190 | - | - | |
Car06g01490 | 862 | MobiDBLite | consensus disorder prediction | 102 | 158 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car06g00301 | Car-Chr6:1678624 | Car06g01490 | Car-Chr6:10509629 | 1.41E-91 | dispersed | |
Car06g01490 | Car-Chr6:10509629 | Car17g00984 | Car-Chr17:7900030 | 7.33E-104 | dispersed | |
Car12g01142 | Car-Chr12:11075178 | Car06g01490 | Car-Chr6:10509629 | 2.29E-107 | transposed | |
Car19g00342 | Car-Chr19:5283540 | Car06g01490 | Car-Chr6:10509629 | 1.41E-78 | transposed | |
Car14g00959 | Car-Chr14:5910123 | Car06g01490 | Car-Chr6:10509629 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car06g01490 | K02540 | - | csv:101219546 | 1588.16 |