Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00002 ATGGCTGCTGCAGCTTCCCATTTGAAGTTCCTCCTCACCCCTCTGATGCTTACACTTGCGTTGCTCCTCCTTCCTTGTGCCTTCTCCCACTCTCTATCCCTCAAGGCACAAGCTTCTCTTCTGGTTTCCATCAAACAGTGTTTCGATCAACCCACTCCCTTGCTCCTGGACTGGAATGCTTCAAATTACTCTTCCCTCTGCTCTTGGACTGGAATTCAATGCGACCACATGAACACATCACTAGTGTCGCTGGACATTTCCAATTCCAACCTCTCCGGGACCTTCCCCCCTCTAATTCACAACCTAACCAACCTTCGCTTTCTCAACATCTCCAACAATCAGCTCCGCGGACAACTCCACTGGGACTACTCTCAACTCAAACTGCTGCAGGTATTTGATGCTTACAATAACAACTTCAATGGGTCGCTCCCTACGGCCGTCCCTCAACTTCCCAGTTTAAAGCATTTAAATCTTGGCGGAAATTTCTTTAGCGGTGGAATCCCCCGAAGCTATGGTGCGATGGGGAAGCTCACTTACCTGTCGCTTGGCGGCAATGACCTGGGCGGTCCCATTCCCACTGAGCTCGGCAATCTAACCAACCTACAGCGGCTTTATTTGGGATACTTCAATGAGTTTGAGGGTGGAATACCCTCAGAATTCGGAAAGCTTGTGAATTTGAATCATCTCGACCTTGCCAGTTGTAGTTTACGGGGTCCAATCCCACCCGAGTTGGGGAACCTCAACAAGTTAGACACTCTGTTCTTGCAGACAAATCAGCTCACTGGTTCTATTCCTCCTCAGTTGGGCAACTTGAGCAGCTTGGTTTCGCTTGACCTCTCCAACAACGAACTAACTGGAGAGGTCCCCCTTGAATTTGCAAACCTCCGCCAGCTTTTGCTCTTGAACTTATTCATCAACAAGTTTCATGGAGAGATTCCTGAGGCTCTAGCCGATCTTCCCAAGTTGGAGGTTCTGAAGGTGTGGCAAAATAACTTCACTGGAGCCATTCCATCAAAGCTTGGTGAGAATGGGAGACTGACGGAGCTCGACTTGTCCACCAACAAGCTCACAGGACTGGTCCCGGAGCGTCTGTGCTTGGGAGGAAGGCTGAAGATCTTGATTTTACTGAACAATTTTCTGTTTGGGCCTCTGCCACGTGATCTAGGACGATGCCAGACGCTTGTGAGAGTTCGGATGGGCCAGAATTATTTGACGGGGCCAATCCCAGAGGGGCTGCTTTACTTGCCACAGCTCTCCCTCGTGGAATTGCAGAACAACTACCTGAGTGGACCCCTTCCACAAGATATGCGAATGCGTCCACTCCCATCTAAACTCGCCCAGCTAAACCTTGCCAACAATCGCTTTTCTGGATCCCTTCCCACCTCCATCGGAAACTTCACAAACTTGCAGATTCTGCTTCTGCGTGGAAACCGTTTCTCCGGGGACATTCCTTCTCAAATAGGCAAACTGCGAAATCTTCTCAAGCTAGACATGAACAGCAACAACTTCTCCGGTACAATCCCACCTGAACTGGGTGCTTGTGTCTCCCTCACTTACCTGGATTTGAGCCTTAATCACCTAACCTCTCCAATCCCAGTTCAAATCTCACAGATTCGCATCTTGAATTATCTGAACCTGTCTTGGAACCATCTGAACCAGAGCCTTCCGAAGGAAATTGGGTCCATAAAGAGCTTGACTTGTGCGGACTTTTCCTATAATGACTTGTCTGGTCCTATTCCCGAAACTGGTCAGTTTCTACTCTTCAATTCCACATCCTTCGAGGGCAACCCTCAACTGTGTGGATCCGCGTTGAATCCCTGCAACGTGTCAACCTCTAAATCTCGAACCTCAACGCCCGCCAATTCCAAAACTGTTGGGAAATATAAGCTTGTGTTTGCTTTGGGACTATTGATGTGTTCAGTAATATTTGCAGCTCTGGCAATTATTCAGACAAGGAAGGCCAAGAAGAAATCAAGTTCGTGGAAGCTAGCAGCATTCCAGAAGCTGGAATTTGGAAGCAAGGACATCATAGAGTGCGTAAAAGAGAACAACATAATTGGAAAAGGTGGAGCTGGAATTGTGTACAAAGGAGTCATGCCAAGTGGAGAACAAGTAGCCATAAAAAAACTGTTGGCCATAAACAAGGGATCCTCCCATGACAACGGTCTGTCGGCGGAGATACAGACGCTGGGCAAAATCCGTCATAGGAACATCGTGAGATTGCTTGCATTTTGCTCCAATAAGCAGACCAATCTGCTGGTTTACGAGTACATGCCCAATGGAAGTTTAGGAGAAGTTCTCCATGAAAAGAGGGGTGGTTGCCTAAAATGGGGAACCAGGCTGAAGATAGCTATAGAAGCGGCCAAAGGGCTTTGCTATTTGCACCATGATTGTTCCCCCCTAATAATTCATAGAGACGTCAAGTCCAACAACATTCTGCTCAACTCAGATTACGAGGCTCATGTAGCGGACTTCGGGTTGGCCAAGTTCTTGCAAGACAACGGAACATCGGAGTGCATGTCTGTCATAGCCGGTTCTTACGGGTATATTGCTCCAGAATATGCATACACGTTAAAAGTGGATGAAAAAAGTGATGTTTATAGTTTCGGCGTAGTGTTGCTGGAGCTTATAACAGGGCGAAAGCCCGTGGGCAATTTCGGGGAAGATGGTTTGGACATCGTGCAATGGACTAAAATCCAAACCAACTCTACTAAAGAAGGAGTTGTTAAGATATTGGATCAAAGGTTGAGTAACATACCTATAGATGAAGCAAAGCAGATGTTTTTTGTTGCTATGTTATGCGTCCAAGAACATAGCGTGGAGCGGCCAACAATGAGAGAAGTGCTTCAAATGCTTGCACAAGCCCACCAACCAAATACCTTCCACATGCATTGA 2895 47.39 MAAAASHLKFLLTPLMLTLALLLLPCAFSHSLSLKAQASLLVSIKQCFDQPTPLLLDWNASNYSSLCSWTGIQCDHMNTSLVSLDISNSNLSGTFPPLIHNLTNLRFLNISNNQLRGQLHWDYSQLKLLQVFDAYNNNFNGSLPTAVPQLPSLKHLNLGGNFFSGGIPRSYGAMGKLTYLSLGGNDLGGPIPTELGNLTNLQRLYLGYFNEFEGGIPSEFGKLVNLNHLDLASCSLRGPIPPELGNLNKLDTLFLQTNQLTGSIPPQLGNLSSLVSLDLSNNELTGEVPLEFANLRQLLLLNLFINKFHGEIPEALADLPKLEVLKVWQNNFTGAIPSKLGENGRLTELDLSTNKLTGLVPERLCLGGRLKILILLNNFLFGPLPRDLGRCQTLVRVRMGQNYLTGPIPEGLLYLPQLSLVELQNNYLSGPLPQDMRMRPLPSKLAQLNLANNRFSGSLPTSIGNFTNLQILLLRGNRFSGDIPSQIGKLRNLLKLDMNSNNFSGTIPPELGACVSLTYLDLSLNHLTSPIPVQISQIRILNYLNLSWNHLNQSLPKEIGSIKSLTCADFSYNDLSGPIPETGQFLLFNSTSFEGNPQLCGSALNPCNVSTSKSRTSTPANSKTVGKYKLVFALGLLMCSVIFAALAIIQTRKAKKKSSSWKLAAFQKLEFGSKDIIECVKENNIIGKGGAGIVYKGVMPSGEQVAIKKLLAINKGSSHDNGLSAEIQTLGKIRHRNIVRLLAFCSNKQTNLLVYEYMPNGSLGEVLHEKRGGCLKWGTRLKIAIEAAKGLCYLHHDCSPLIIHRDVKSNNILLNSDYEAHVADFGLAKFLQDNGTSECMSVIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRKPVGNFGEDGLDIVQWTKIQTNSTKEGVVKILDQRLSNIPIDEAKQMFFVAMLCVQEHSVERPTMREVLQMLAQAHQPNTFHMH 964
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 25091 28920 + Carg14914-RA Car07g00002 151236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00002 964 Pfam Leucine Rich Repeat 152 170 IPR001611 GO:0005515
Car07g00002 964 Pfam Leucine rich repeat N-terminal domain 35 75 IPR013210 -
Car07g00002 964 ProSiteProfiles Protein kinase domain profile. 680 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00002 964 ProSitePatterns Serine/Threonine protein kinases active-site signature. 802 814 IPR008271 GO:0004672|GO:0006468
Car07g00002 964 Pfam Protein kinase domain 682 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00002 964 Pfam Leucine Rich repeat 514 529 IPR001611 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00842 Car-Chr4:4908300 Car07g00002 Car-Chr7:25091 0 dispersed
Car07g00002 Car-Chr7:25091 Car07g00534 Car-Chr7:2714563 0 dispersed
Car07g00002 Car-Chr7:25091 Car07g01339 Car-Chr7:8425717 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88963 PF00069 Pkinase 2.20E-47 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00002 - - vvi:100258232 1415.59