Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00033 ATGGGGAAGAAGAAGAAGAGGGTTTCGTCCAAGGTATGGTGCTACTATTGCGACAGGGAATTCGACGACGAGAAGATATTGGTGCAGCATCAGAAGGCCAAGCACTTTAAGTGCCATGTCTGCCATAAGAAGCTTTCTACTGCTGGTGGTATGGTCATCCACGTTCTCCAGGTCCACAAAGAGTCAGTCACCAAAGTTCCTAATGCAAAGGCTGGCAGAGAATCAACAGATATTGAAATATATGGAATGCAAGGAATTCCACCTGATGTCTTGGCAGCACACTATGGAGAGGAGGATGAAGAGTCTGCATCGAAGGTGGCCAAAGTGGAGATGCCACCAACTCAGATGGTTGGTGGTATGGTGCATGGATCGCTAGGTATTATGTACCCTCCTCAACCAGGTTTAGCTGCAATGCGACCTATTTATGCTTCAACTGGACAAGCGCAGCCTACTGCCTGGCAAGTTCCACCTCGTCCCCAACCTTGGTTTCCCCCAAATTCAGCCGTTTCAATTCCCCCTCCTGCCCCATTGGGCTATGCTCAGCAGCCACTATTTCCTGTGCAGACTGGTAGGCCCCCACTCCCAGTATCTTCAACTCCTATGCTCCAGCCTTCACAAATAACGCCTCCTGGATTGCCTTCAACTACACCTTCAGTTTCAGTATCTCAACCATTGTTCCCTGTTGTTAGTAATAGCCACGGATCTACCCAAAGCTCTCCTTTTCCTTCATCTTCACTTCCAACAAGCATTCCTTTGACATCTGCAGCAGAAATCAAGGGCTCATTGAGTATACATTTGGGTACTAACTCCTTTTCCACTATTTGCAATCAAGTTCCAATCATTCCAGGTGGAGTATTGAGCAATTCACACTCTTATGCCTCGGGACCAAATACTGGCGGTCCGTCCATTGGACCTCCTCCTGTAATTGCGAATAAAGCTCCTATTCAGCCATCAACAAATGAAGTATATTTGGTTTGGGATGATGAGGCGATGTCTATGGAGGAAAGAAGAATGTCCTTAACTAAGTATCAGGTGCATGATGAAACTAGCCAGGTAAGTTATACTACAACTTAA 1074 46.55 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMVIHVLQVHKESVTKVPNAKAGRESTDIEIYGMQGIPPDVLAAHYGEEDEESASKVAKVEMPPTQMVGGMVHGSLGIMYPPQPGLAAMRPIYASTGQAQPTAWQVPPRPQPWFPPNSAVSIPPPAPLGYAQQPLFPVQTGRPPLPVSSTPMLQPSQITPPGLPSTTPSVSVSQPLFPVVSNSHGSTQSSPFPSSSLPTSIPLTSAAEIKGSLSIHLGTNSFSTICNQVPIIPGGVLSNSHSYASGPNTGGPSIGPPPVIANKAPIQPSTNEVYLVWDDEAMSMEERRMSLTKYQVHDETSQVSYTTT 357
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 205106 210995 + Carg14945-RA Car07g00033 151267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00033 357 ProSiteProfiles Zinc finger BED-type profile. 7 66 IPR003656 GO:0003677
Car07g00033 357 MobiDBLite consensus disorder prediction 292 314 - -
Car07g00033 357 ProSitePatterns Zinc finger C2H2 type domain signature. 38 59 IPR013087 -
Car07g00033 357 ProSitePatterns Zinc finger C2H2 type domain signature. 14 35 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g01340 Car-Chr3:10154293 Car07g00033 Car-Chr7:205106 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3777 None None None None Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00033 - - cmo:103484275 609.372