Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car07g00052 | ATGGTCACTTGCATGAATTTGACACTTTTTGTGGTCTCTATAATTATTTTTTACAGGTCCAAATATGAACTTCAAGAATTTCTGAAACCGAGCTTGAGAATTTTATCGAACTCCGACAAAAGCAATGTCCAAGCAAACTTTGCTTCAAAGGTCATGAACAGTTTTCGTTCAAATTCTTCACAAAAAGCACACTTGCAGAAGGGTATGGTAGAGTTTCTTGGATTATTGAAGGTGAAAGTGATTAAAGGGACAAACTTAGCTATCAGGGATATGATGTCGAGCGATCCTTATGTAGTCTTGACTCTTGGCCAACAGACTGTCCAGACAGGTATAATCAGGAGCAACTTGAATCCTGTGTGGAATGAGGAACTGATGCTATCTGTACCTCAAGCTTTTGGAACCTTGAAGTTGCAAGTATACGACTATGACACGTTTACAGCAGACGACATAATGGGAGAAGCAGAAATTGATCTCCAGCCCTTGATAACATCAGCAATGGCATTTGGGGATGCTGGAATGTTTTCAAACATGCAAATTGGAAAATGGCTGAAATCACACGATAATGCTCTCATAGGCGATAGCACCGTTAATATTGTGGATGGGAAGGTAAAGCAAGAGATATCACTCCAGCTGCAGAATGTGGAATCAGGAGAACTAGATCTAGAGCTAGAATGGATGCCTCTTGGACAATAG | 693 | 40.4 | MVTCMNLTLFVVSIIIFYRSKYELQEFLKPSLRILSNSDKSNVQANFASKVMNSFRSNSSQKAHLQKGMVEFLGLLKVKVIKGTNLAIRDMMSSDPYVVLTLGQQTVQTGIIRSNLNPVWNEELMLSVPQAFGTLKLQVYDYDTFTADDIMGEAEIDLQPLITSAMAFGDAGMFSNMQIGKWLKSHDNALIGDSTVNIVDGKVKQEISLQLQNVESGELDLELEWMPLGQ | 230 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 343146 | 344484 | - | Carg14964-RA | Car07g00052 | 151286 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car07g00052 | 230 | Pfam | C2 domain | 74 | 164 | IPR000008 | - | |
| Car07g00052 | 230 | ProSiteProfiles | C2 domain profile. | 56 | 171 | IPR000008 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car07g00052 | Car-Chr7:343146 | Car15g00768 | Car-Chr15:4349247 | 9.41E-69 | dispersed | |
| Car18g00066 | Car-Chr18:340416 | Car07g00052 | Car-Chr7:343146 | 1.15E-41 | dispersed | |
| Car13g00382 | Car-Chr13:6365479 | Car07g00052 | Car-Chr7:343146 | 1.49E-111 | wgd | |
| Car18g00478 | Car-Chr18:3183455 | Car07g00052 | Car-Chr7:343146 | 7.02E-83 | wgd | |
| Car03g01309 | Car-Chr3:9996184 | Car07g00052 | Car-Chr7:343146 | 7.05E-41 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car07g00052 | K12486 | - | csv:101218116 | 374.015 |