Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00056 ATGGTCTTTAGGGGTTTCAACGATGCTGTTAATGGGTTTGCGGATGATGGTTGGTCAGCTATGAGCAGTGATGGTTTGGAGGATGTGACAATTGTCATAAACTCATCAGCAAACAAGTTACCTGGGTCACAGTATAAAACGTCTATGTATCCCTCTTTTGGTGGAGTGATGTGTGCAAAAGCATCAATGTTGCTTCAGAATGTTCCCCCTGCTTTGCTTATTCGATTCTTGAGGGAGCATCGATCTGAATGGGCTGATTATGGAGTTGATGCCTACTCCGCTGCGAGTTTAAAAGCCAGTCCATATGCTGTTCCATGCGCAAGGCCCGGTGGTTTCCCTAGCAGCCAGGTTATTTTGCCTCTTGCTCACACTGTGGAGCACGAAGAGTTTCTGGAGGTGGTTCGGTTGGAGGGCCTTGCATTCTCCCCTGAAGATGTTGCTTTGGCTGGACGAGATATGTACTTGTTGCAGCTCTGTAATGGGGTTGATGAGAATGCAGTTGGAGCTTGTGCTCAGCTTGTGTTTGCGCCTATTGATGAATCTTTTGCCGATGATGCTCCGTTACTTCCTTCTGGTTTTCGTGTCATACCCCTGGATCCAAAAACGGATGAGCCCACTGCTAATCGAACATTGGATTTGGCTTCTACTCTTGAAGTCGGTGCCAACGGTGCACGCTCTGGTGGTGAAGCTGATTTGAGCACCTACAACCTCCGGTCGGTCTTGACTATTGCCTTCCAGTTCACTTTTGAGAATCACTTACAGGAAAATGTGGCTGCTATGGCTCGACAATACGTTCGTAGCGTTGTGGGGTCTGTTCAGAGGGTTGCTATGGCCATTGCCCCATCACAGATCCATGTTGGAGCTGAGCTCCTTCAAGCCGATTCCCAGTCTGGGGATGCCATGTTGAAGCAGCTCTGGCACCACTCAGATGCAATCATGTGTTGCTCCGTCAAAGCCAACGCATCTGCTGTGTTCACCTTTGCCAACCAGGCCGGTCTGGACATGCTTGAAACCACTCTTGTTGGCCTGCAAGATATAATGCTCGACAAAATTCTCGACGAAGCGGGTCGGAAGATCCTCTGTTCTGAATTCCCCAAAATAATGCAGCAGGGATTCACAAATCTGCCGTCTGGCATTTGCGTATCAAGTATGGGTCGTCCTATTTCTTACGAGCAAGGCGTTGCCTGGAAGGTTCTAAATGATGATGATTCCAATCACTGTCTGGCTTTCATGTTCATAAACTGGATTCAGTAG 1254 48.33 MVFRGFNDAVNGFADDGWSAMSSDGLEDVTIVINSSANKLPGSQYKTSMYPSFGGVMCAKASMLLQNVPPALLIRFLREHRSEWADYGVDAYSAASLKASPYAVPCARPGGFPSSQVILPLAHTVEHEEFLEVVRLEGLAFSPEDVALAGRDMYLLQLCNGVDENAVGACAQLVFAPIDESFADDAPLLPSGFRVIPLDPKTDEPTANRTLDLASTLEVGANGARSGGEADLSTYNLRSVLTIAFQFTFENHLQENVAAMARQYVRSVVGSVQRVAMAIAPSQIHVGAELLQADSQSGDAMLKQLWHHSDAIMCCSVKANASAVFTFANQAGLDMLETTLVGLQDIMLDKILDEAGRKILCSEFPKIMQQGFTNLPSGICVSSMGRPISYEQGVAWKVLNDDDSNHCLAFMFINWIQ 417
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 356272 358569 + Carg14968-RA Car07g00056 151290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00056 417 Pfam MEKHLA domain 283 415 IPR013978 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g01305 Car07g00056 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00056 Car-Chr7:356272 Car03g01305 Car-Chr3:9972929 0 dispersed
Car13g00385 Car-Chr13:6386083 Car07g00056 Car-Chr7:356272 1.19E-76 wgd
Car03g01304 Car-Chr3:9971940 Car07g00056 Car-Chr7:356272 1.85E-88 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00056 K09338 - csv:101210154 763.451