Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00105 ATGGACGTGGGTGAAGAAATTAGGGCAGCTCACAAGAGAGACTTTTTGGAATTCCTTGAACAGGATGTTGGGAAAGGAATTTACATGGACGAGATCAAATCCATGATTAATCATAAGCGACATCGCCTTATAATCAACATTTCCGATCTTCACTCTTTCAGAGATCTTGGTCCCAGGGTGCTCAGGAATCCCGGCGAGTACATTCAGCCATTCTGCGATGCAGTCACAGAAACTGCTCGCAGTATTGATCCAAAATATCTCAAGGAGGGAGAGCAAGTTTTGGTGGGTTTTGAGGGCCCCTTTGTTTCTCGCCGTGTCACTCCTAGGGAACTTCTCTCTCAGTTCATTGGCTCCATGGTCTGCGTTGAGGGCATTGTCACCAAATGTTCCCTTGTCAGACCAAAAGTTGTCAAAAGTGTTCATTTCTGCCCCACAACCGGTGGTTTTACCAGCCGTGAATACCGTGACATTGCATCCAACATGGGCTTGCCCACAGGATCTGTGTATCCCACAAGGGATGAAAATGGCAACTTGTTGGTTACCGAGTATGGCTTGTGTAGATACAAAGATCATCAGACTTTATCAATGCAAGAAATGCCTGAGAATTCAGCGCCTGGTCAGCTTCCACGAACAGTGGATGTCATAGTCGAGGATGACTTAGTTGACTGTTGCAAGCCAGGTGATCGTGTTGCAATTGTAGGAATATATAAAGCTCTTCCAGGAAAAAGTAAGGGCAGCGTGAATGGAGTGTTCAGGTAG 759 46.11 MDVGEEIRAAHKRDFLEFLEQDVGKGIYMDEIKSMINHKRHRLIINISDLHSFRDLGPRVLRNPGEYIQPFCDAVTETARSIDPKYLKEGEQVLVGFEGPFVSRRVTPRELLSQFIGSMVCVEGIVTKCSLVRPKVVKSVHFCPTTGGFTSREYRDIASNMGLPTGSVYPTRDENGNLLVTEYGLCRYKDHQTLSMQEMPENSAPGQLPRTVDVIVEDDLVDCCKPGDRVAIVGIYKALPGKSKGSVNGVFR 252
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 637765 639585 - Carg15018-RA Car07g00105 151339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00105 252 Pfam MCM N-terminal domain 12 84 IPR027925 -
Car07g00105 252 Pfam MCM OB domain 109 239 IPR033762 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00105 Car-Chr7:637765 Car17g00984 Car-Chr17:7900030 7.76E-17 dispersed
Car07g00105 Car-Chr7:637765 Car11g00916 Car-Chr11:5807542 8.54E-20 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00105 K02541 - csv:101210889 499.59