Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00110 ATGTCAGATGAAATGTTTACAGATCTATTTTTCTCGAACCCTTTTCGAGACGGTGGGTTCGGGGACTCGGAAACAGCCAGGAATTTTGGGGTGTTGAATGAAATTTTGGGGACTCCGATGAGTTCTTGTGGGTCGTTGTCGTCTTCCGATGCTGGAGCTGAGGAAGATGGTTCTGGGAAAGAGAAGGAGAAGGCGATGAAAGACATGGAAGATGGTGGAGAGAGTTCCAAAGCTGCAGGTAAAGCGAAGAAGAAAGAAAGAGAGCCGAGATTTGCTTTCATGACAAAGACTGAGATCGATCATCTTGAAGATGGATATCGATGGAGAAAATATGGACAGAAGGCCGTCAAGAACAGTATTTTTCCCAGGAGCTATTACAGATGTACAACTCCGAACTGTGGAGTGAAGAAACGTGTAGAAAGATCGTTTCAAGATCCATCCATTGTAATCACGACGTACGAAGGGCAACACAACCACCCAATTGCGGCAACGCTGAGAGGAAATCTGTCGGCGGCCGCCGCATTTCCACCGTCCATGTTGGCACCAATGCCAGTGGTCGGTGGCGCTGGGTTTCTTCCGAAACCGTTGAGCGACCCTTCCGGCAACAGTCAGGTTGTCGGCGGTGACGGCTACGTTTATTCACAGAGCAGCTTCGGGTATCCTTACAACGAGCAGCAATCGGAATATGGGGTTTTGCAGGACATTTTTCCATCTCCGTCGTCGTTCTTCAACCGGCAGTCGTGA 744 49.06 MSDEMFTDLFFSNPFRDGGFGDSETARNFGVLNEILGTPMSSCGSLSSSDAGAEEDGSGKEKEKAMKDMEDGGESSKAAGKAKKKEREPRFAFMTKTEIDHLEDGYRWRKYGQKAVKNSIFPRSYYRCTTPNCGVKKRVERSFQDPSIVITTYEGQHNHPIAATLRGNLSAAAAFPPSMLAPMPVVGGAGFLPKPLSDPSGNSQVVGGDGYVYSQSSFGYPYNEQQSEYGVLQDIFPSPSSFFNRQS 247
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 709532 710861 - Carg23076-RA Car07g00110 151344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00110 247 Pfam WRKY DNA -binding domain 103 160 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car07g00110 247 MobiDBLite consensus disorder prediction 41 89 - -
Car07g00110 247 MobiDBLite consensus disorder prediction 54 89 - -
Car07g00110 247 ProSiteProfiles WRKY domain profile. 97 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g01238 Car07g00110 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00110 Car-Chr7:709532 Car19g00856 Car-Chr19:8938314 3.68E-52 dispersed
Car03g01238 Car-Chr3:9577419 Car07g00110 Car-Chr7:709532 2.04E-102 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3786 PF03106 WRKY 4.40E-26 CL0274 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00110 - - cmo:103484390 296.204