Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00111 ATGGAGAAAGAGCCTCTTCTTCCATATATGAGCCCAAGAGGGAAACCGCCTTCTCTGCCTCAATTATATCCACTCCCTGAAAATGATGAAATTATTCTCCCTATGACGCCCACGGAGTTCAAAGATCGCCTGATCTTTGGCCCTTCATCTTCCCCTCAAGATGCTTCTTCTGCGTTCGATGCTTTGACACTGTCTCTTGCCTCACCGAGACCCTCTGCTTCGTCTTCTCGTCAGGACCCATCTACCCCTTTGGACCCCAAATCCCAATCGCCGTCTCAACAGGGATGGCTTGTGGATTCGAAGCATTCATGCCACAAAAGCAACCTCCACCGCTCTAAAACAGCACCTGCCATGGCGGTCATCAATGATATCAACCATTCGCAGGTGCCCAAGCCACAATTTGGCAAACAATCTATAATCCGCCAAGCTGTTGTTCTTCTAATTATTTACTTATCATTGGGTGTGGTTATATATTGGATTAATCGCGATAATTTTTCAGCTTCGGAGACTCATCCCGTGGTCGATGCATTGTACTTTTGCATTGTAACGATGTGCACTATTGGGTATGGAGATATTACTCCAAATAGTCCAGCGACTAAGCTGTTCTCAGTTTTGTTTGTGTTGGTGGGCTTTGGGTTTATTGATATATTGCTGTCTGGAATGGTCAGTTATGTGCTTGATTTGCAGGAGAGTTATTTGTTAAGAAATGTGAAGAGGGGCGTGCAGCGTGAATCTGGGAAATCCTATATAATTGATGTGAAGAAGGGAAGAATGAGGATTAGAATGAAAGTGGCATTGGCCTTAGGTGTTGTGATACTTTGTATAGGAATTGGCATGGGTGTTATGCATTTTGTTGAGGACTTAGGGTGGTTGGATTCATTTTATCTTTCAGTCATGTCTGTGACAACCGTTGGATATGGTGATCAGGCGTTCAAGTCGATGACGGGTCGTATTTTCGCTTCAATCTGGTTGCTTGTATCGACCCTTGCTGTCGCTCGGGCGTTCCTTTATTTAGCAGAGGCAAGAGTGGATAAGCGGCATAGGATGATGGCAAAATGGATACTTGGTCAGGACATGACTGTCTCTGAGTTTCTTGCTGCTGATACCGACAACAATGGCTGTGTGAGTAGATCAGAATATGTGGTATACAAGCTGAAGGAGATGGGTAAGGTATCAGAGAAAGATGTGATGCAGATATCGAATAACTTCGATAGACTAGACACTGGGAAATGTGGGAAGATTACGTTGGCCGATCTCTTGCAAAATCATCACTGA 1275 44.55 MEKEPLLPYMSPRGKPPSLPQLYPLPENDEIILPMTPTEFKDRLIFGPSSSPQDASSAFDALTLSLASPRPSASSSRQDPSTPLDPKSQSPSQQGWLVDSKHSCHKSNLHRSKTAPAMAVINDINHSQVPKPQFGKQSIIRQAVVLLIIYLSLGVVIYWINRDNFSASETHPVVDALYFCIVTMCTIGYGDITPNSPATKLFSVLFVLVGFGFIDILLSGMVSYVLDLQESYLLRNVKRGVQRESGKSYIIDVKKGRMRIRMKVALALGVVILCIGIGMGVMHFVEDLGWLDSFYLSVMSVTTVGYGDQAFKSMTGRIFASIWLLVSTLAVARAFLYLAEARVDKRHRMMAKWILGQDMTVSEFLAADTDNNGCVSRSEYVVYKLKEMGKVSEKDVMQISNNFDRLDTGKCGKITLADLLQNHH 424
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 713617 716419 - Carg23077-RA Car07g00111 151345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00111 424 MobiDBLite consensus disorder prediction 68 97 - -
Car07g00111 424 MobiDBLite consensus disorder prediction 1 25 - -
Car07g00111 424 ProSitePatterns EF-hand calcium-binding domain. 368 380 IPR018247 -
Car07g00111 424 Pfam Ion channel 146 225 IPR013099 -
Car07g00111 424 Pfam Ion channel 270 339 IPR013099 -
Car07g00111 424 MobiDBLite consensus disorder prediction 43 62 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g01237 Car07g00111 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00954 Car-Chr1:9161999 Car07g00111 Car-Chr7:713617 9.21E-67 dispersed
Car07g00111 Car-Chr7:713617 Car18g00550 Car-Chr18:5182713 7.40E-64 dispersed
Car03g01237 Car-Chr3:9568600 Car07g00111 Car-Chr7:713617 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00111 K05389 - csv:101220017 740.725