Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00152 ATGGCCGACCGGCCGGACACCGACAAGAAGACCGAGACTACCAAGAAGGACATGCCGGCTCTTCTTTTGGGCCGATACGAGATCGGGAAGCTCCTTGGTCACGGCACCTTCGCTAAGGTCTACCATGCCCGGAACATTAAAACCGACCAAAGTGTCGCCATTAAAGTTATCGACAAGGAGAAGATCCTCAAGGGTGGTCTAATCGCCCACATCAAACGCGAGATCTCTATCCTCCGCCGCGTTCGACACCCCAATATCGTCCAACTCTTTGAGGTTATGGCCACCAAGGCCAAGATCTACTTCGTTATGGAATATGTACGCGGCGGCGAGCTTTTCAAGAAGGTCTCCAAGGGCCGATTGAAGGAAGAGGTTGCTCGGAAGTACTTTCAGCAATTAATCTCCGCCGTTGCCTTTTGCCATGCGCGCGGTGTTTTTCATCGCGACCTTAAACCGGAGAATTTGTTGCTGGATGAAAATGGGAATCTTAAGGTCTCCGATTTCGGCCTTAGTGCCGTGTCCGACCAAATTCGACAAGATGGGTTGTTTCATACTTTTTGTGGTACACCGGCGTATGTTGCTCCGGAGGTTTTGACCCGGAAAGGGTACGAGGCCGCAAAGGTAGATATTTGGTCCTGTGGGGTTATTCTGTTTGTTCTGATGGCCGGCTATCTGCCCTTCCACGACCAAAATATTATGGCAATGTATAAGAAGATTTACAGGGGTGAGTTCCGTTGTCCGAGATGGTTTTCCCCGGAGCTAATTCGACTCCTATCTCGTCTTTTGGACACAAACCCCGAAACCCGTTTCACAATTCCAGAAATCATGGAGAATAGATGGTTCAAAAAGGGTTACAAGCATATCAAATTCTACATCGAAGATGATAAGGTTTGCAGCGTTGAGGACGACCAAAACGATGTCGATATTATCGATTCCTCGTCGGATCAATCTCAATCCGAATCGGATTCCGAAATAATTGAGACCAGAAGAAAGGTTAGTACACTCCCAAGACCGGCGAGTTTGAATGCATTTGACATCATTTCGTTCTCGCCTGGATTTGATCTTTCGGGGTTGTTTGAGGACGGAGGGGAAGAGGCAAGATTTGTGTCCAGTGCGCCGGTGTCGAAGATCATATCGAAATTGGAGGAGATCGCAAAATTGGTGAGTTTCACGGTGAGGAAGAAGGATTGCAGAGTGAGTTTAGAAGGGTCGCGGGAAGGAGTAAAAGGGCCATTGACGATCGCAGCAGAGGTATTCGAGTTGACGCAGAAATTAGTGATGGTGGAGGTGAAGAGGAAAGGGGGAGATAAAGCAGAGTATGAACAGTTCTGTAACGAGGAATTGAAACCGGCATTGTTGAATTTGAAGGTGGAGGTGGAGGACTCTGCTGCCGCTCCATCATCACATATACCATCAGATACCGAATGA 1425 48.35 MADRPDTDKKTETTKKDMPALLLGRYEIGKLLGHGTFAKVYHARNIKTDQSVAIKVIDKEKILKGGLIAHIKREISILRRVRHPNIVQLFEVMATKAKIYFVMEYVRGGELFKKVSKGRLKEEVARKYFQQLISAVAFCHARGVFHRDLKPENLLLDENGNLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLTRKGYEAAKVDIWSCGVILFVLMAGYLPFHDQNIMAMYKKIYRGEFRCPRWFSPELIRLLSRLLDTNPETRFTIPEIMENRWFKKGYKHIKFYIEDDKVCSVEDDQNDVDIIDSSSDQSQSESDSEIIETRRKVSTLPRPASLNAFDIISFSPGFDLSGLFEDGGEEARFVSSAPVSKIISKLEEIAKLVSFTVRKKDCRVSLEGSREGVKGPLTIAAEVFELTQKLVMVEVKRKGGDKAEYEQFCNEELKPALLNLKVEVEDSAAAPSSHIPSDTE 474
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 901940 903364 + Carg23118-RA Car07g00152 151386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00152 474 CDD STKc_SnRK3 25 279 - -
Car07g00152 474 PANTHER - 17 465 - -
Car07g00152 474 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 17 465 - -
Car07g00152 474 CDD CIPK_C 341 451 - -
Car07g00152 474 ProSitePatterns Protein kinases ATP-binding region signature. 32 55 IPR017441 GO:0005524
Car07g00152 474 Pfam NAF domain 337 393 IPR004041 GO:0007165
Car07g00152 474 Gene3D Transferase(Phosphotransferase) domain 1 17 337 - -
Car07g00152 474 ProSiteProfiles NAF domain profile. 335 359 IPR018451 GO:0007165
Car07g00152 474 SMART serkin_6 26 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00152 474 MobiDBLite consensus disorder prediction 308 328 - -
Car07g00152 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Car07g00152 474 Pfam Protein kinase domain 26 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00152 474 Gene3D Kinase associated domain 1, KA1 338 455 - -
Car07g00152 474 SUPERFAMILY Protein kinase-like (PK-like) 22 292 IPR011009 -
Car07g00152 474 ProSiteProfiles Protein kinase domain profile. 26 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car07g00152 Car13g00481 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00152 Car-Chr7:901940 Car07g01185 Car-Chr7:7195590 1.64E-178 dispersed
Car20g00275 Car-Chr20:1595226 Car07g00152 Car-Chr7:901940 4.14E-161 dispersed
Car13g00481 Car-Chr13:7049770 Car07g00152 Car-Chr7:901940 0 wgd
Car18g00395 Car-Chr18:2439682 Car07g00152 Car-Chr7:901940 9.96E-145 wgd
Car03g01191 Car-Chr3:9389559 Car07g00152 Car-Chr7:901940 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88966 PF00069 Pkinase 4.60E-76 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00152 - - csv:101214053 841.647