Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car07g00157 | ATGGCTGAGGTTCACTGTAGCAACACTGGTGGAATTAAGCTCTTTGGCACCGTCATCACTTTACAGACCAGAAGCATCAAGGAGGAGCCGGAGAAAGGTGGTGACGGTGGCGGTGGCGATCAACCAGAGATGAAGAGGCCGGAAAAAATAATTCCATGTCCAAGGTGTAAGAGCATGGACACCAAATTCTGTTACTTCAACAATTACAATGTTAATCAGCCCAGACATTTCTGCAAGGGTTGTCAAAGGTACTGGACGGCAGGTGGGGCGCTACGGAACGTGCCCATCGGAGCCGGCCGCCGGAGAGCCAAGCCGCCGCTGCCTAATTGTCGAATCCTTTCCGGAGAGCTTCCCGAGGATTATGGGCAGCTTTACGATGCTGCTTCTGGGATTATTCATCAGCTTGAATTGGATGCGGTGGAGGGGTGGCATCTCACGGTGGCAGAACAGGATTTCGCCCAAGTTTTCCCTCTCAAACGCCAGAAGATTATCGGTCAACACGGTCAAACGTCCTGA | 516 | 52.13 | MAEVHCSNTGGIKLFGTVITLQTRSIKEEPEKGGDGGGGDQPEMKRPEKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPEDYGQLYDAASGIIHQLELDAVEGWHLTVAEQDFAQVFPLKRQKIIGQHGQTS | 171 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 943823 | 944338 | + | Carg18210-RA | Car07g00157 | 151391 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car07g00157 | 171 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.5-LIKE | 8 | 164 | - | - | |
Car07g00157 | 171 | ProSitePatterns | Zinc finger Dof-type signature. | 53 | 89 | IPR003851 | GO:0003677|GO:0006355 | |
Car07g00157 | 171 | MobiDBLite | consensus disorder prediction | 25 | 47 | - | - | |
Car07g00157 | 171 | Pfam | Dof domain, zinc finger | 49 | 104 | IPR003851 | GO:0003677|GO:0006355 | |
Car07g00157 | 171 | ProSiteProfiles | Zinc finger Dof-type profile. | 51 | 105 | IPR003851 | GO:0003677|GO:0006355 | |
Car07g00157 | 171 | PANTHER | CYCLIC DOF FACTOR 2 | 8 | 164 | IPR045174 | GO:0003700|GO:0006355 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car07g00157 | Car13g00488 | CCT | |
Car07g00157 | Car18g00388 | CCT | |
Car03g01185 | Car07g00157 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car07g00157 | Car-Chr7:943823 | Car14g00485 | Car-Chr14:2606480 | 9.93E-38 | dispersed | |
Car13g00488 | Car-Chr13:7090732 | Car07g00157 | Car-Chr7:943823 | 1.84E-54 | wgd | |
Car18g00388 | Car-Chr18:2375129 | Car07g00157 | Car-Chr7:943823 | 4.88E-52 | wgd | |
Car03g01185 | Car-Chr3:9370387 | Car07g00157 | Car-Chr7:943823 | 1.89E-107 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
3791 | PF02701 | zf-Dof | 1.20E-31 | No_clan | Car | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car07g00157 | - | - | cmax:111496951 | 328.176 |