Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00176 ATGGCTTCCTCAAACAGACACTGGCCTAGCATGTTCAAGTCCAAGCCCTGCAATTCTCACCACCAATGGCAGCATGACATCAACCCAAATCTCTCTTCTTCCACTGCCACTTGCCTCAGATCTGCTCCTTATGCTACAGGTTCTTCTTCTTTTGGTGGGTGTGAAGAGAGGAGTCCAGAGCCAAAACCAAGATGGAATCCAAAACCAGAACAAATTCGGATTCTTGAAGCAATTTTCAATTCCGGGATGGTGAATCCTCCAAGAGATGAAATTAGAAAAATTAGAGCTCAATTGCAGGAGTATGGACAAGTGGGTGATGCTAATGTTTTTTATTGGTTTCAAAACAGAAAATCAAGAAGCAAAAGCAAACTCCGCCATATCCAAAACTCCAAATCTAATAATAATCACAATTCCCAAACCACCACTGCTCCTTTACCATCTCCTATTCCTCCCATCGCCACTGCCACCATCACCACCGCCGCCGCCGCCGCCACAACTTGTTCTTCCTCTTCTTCTTCCGACAAATCTTCTCCAATATCAGCACCCATCAAAACTTTTAGCTCCAATTCAATGACCCAGAACTACCTTCCACAACTCACCAACGAGCTCATGCCTGAACCCTTTTTCTTCCCGGTGTCACAGACCGGCGGCGGTGGCAGCGGTGGAAGCTCTAATTTGAGTCAAGGGTTTTGCTTGTCGGAGCTTTGTAGTGTAGTGCAGCAAGTGCCTGAAGATGGGGTTGTTGGGCCTTGCACAAGCCTGTTGCTGAGTGAGATTATGAACCCAACTGAGGCTTCAAAAAAAGATTTGGATGAGGACAAGATCACGGTGAAGTTGCCGCCTCCATTCATGAATTATCATCCTGTTTTCACTCCCTCCACTGATAACATTCTTCCACCAACCACTATTTCCACCGCCCTCACCACTCTCCCACCTCCTTCCCATACAATTCATCAAGGTGTAGGTGAAGTTTATGGATTAGGTCAAAGCTGTGTAGGGAAGTCAACAGTGTTCATCAATGGTGTGGCGTTCGAGGTGGGTTCTGGTGCGTTCAATGTCCGGGAGGCTTTTGGTGATGAAGCTGTTCTGCTTCACTCCTCTGGTCAGCCTGTTCTCACTAATGAATGGGGCCTCACTCTCCACTCACTCCAACATGGCGCCTCTTATTATCTTGTTAGTTCCATCATATGCCTCTCTTGCCTTTCTTCTATACCTTTCTTGTTTTGA 1227 46.62 MASSNRHWPSMFKSKPCNSHHQWQHDINPNLSSSTATCLRSAPYATGSSSFGGCEERSPEPKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKSKLRHIQNSKSNNNHNSQTTTAPLPSPIPPIATATITTAAAAATTCSSSSSSDKSSPISAPIKTFSSNSMTQNYLPQLTNELMPEPFFFPVSQTGGGGSGGSSNLSQGFCLSELCSVVQQVPEDGVVGPCTSLLLSEIMNPTEASKKDLDEDKITVKLPPPFMNYHPVFTPSTDNILPPTTISTALTTLPPPSHTIHQGVGEVYGLGQSCVGKSTVFINGVAFEVGSGAFNVREAFGDEAVLLHSSGQPVLTNEWGLTLHSLQHGASYYLVSSIICLSCLSSIPFLF 408
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1016031 1017641 + Carg07752-RA Car07g00176 151410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00176 408 MobiDBLite consensus disorder prediction 122 152 - -
Car07g00176 408 MobiDBLite consensus disorder prediction 127 143 - -
Car07g00176 408 Pfam Homeodomain 62 121 IPR001356 GO:0003677
Car07g00176 408 MobiDBLite consensus disorder prediction 45 67 - -
Car07g00176 408 ProSiteProfiles 'Homeobox' domain profile. 58 123 IPR001356 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g01165 Car07g00176 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00058 Car-Chr6:380691 Car07g00176 Car-Chr7:1016031 2.48E-17 dispersed
Car07g00176 Car-Chr7:1016031 Car14g00419 Car-Chr14:2139594 1.14E-15 dispersed
Car03g01165 Car-Chr3:9289111 Car07g00176 Car-Chr7:1016031 1.04E-153 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3794 PF00046 Homeodomain 2.00E-14 CL0123 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00176 - - bhj:120074379 561.992