Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00181 ATGGCTGCTCTTATCGATCTCAATACCACCGAAGAAGACGATGCTCCCTCCTCTGCTGCTTCCTCTGCTTCCTCTTCCTCTGCTTCTGCTTTAACCTCCTCCCCTTCGCCTTCTCTCACCTCCTCAATTTGCTTGGAGCTGTGGCATGCCTGTGCTGGACCTCTTACGTCCTTGCCCAAGAAAGGGAGTTTGGTTGTGTATTTTCCACAGGGCCACTTGGAGCAGATGCAAGAGTTCCCTGCCACGGCGGCCTATGATCTCCCTCCCCACATCCTCTGTCGCGTCATTGATGTTCAGCTTCACGTACGGGCTGAGGCTGGGAGCGACGAGGTTTATGCTCAAGTCTCATTGTTTCCTGAAAACGAGCCCATTGAACACAAGATGCAGGAAGAGATGACCAATGACAGTGAGGGGGAGGATTTTGAAGGAAGTGAGAAGACCACAACACCTCACATGTTCTGCAAGACACTTACTGCTTCAGACACTAGCACTCATGGAGGCTTCTCCGTCCCCAGACGTGCAGCTGAGGATTGCTTCCCGCCATTGGATTATAGTCAACAGAGGCCTTCACAAGAGCTAGTTGCAAAGGATCTCCTTGGGATAAAATGGAAGTTTAGGCACATATATCGCGGGCAGCCCAGAAGGCATTTGCTAACCACTGGATGGAGTGCATTCGTGAACAAGAAAAGGCTTGTTTCTGGTGATGCAGTGCTGTTTCTTAGGGGCAATGATGGGGAATTACGACTCGGGATTCGTCGAGCTGCGCAGCTTAAAAGCGGTTCTGCCGTTTCTAACATTTGCAGTCAGCAACTCAACTCTAGTAGTATCATGGATGTGGTTAATGCTATATCTTCAAAAACTTCCTTTAGCGTATACTATAATCCCAGGGCTACCTCTTCACAGTTTGTCTTGCCTTTCCACAAGTTCTTGAAAAGCATTAACCATTCCTTCTCTGCTGGAATGAGGTTCAGCTTGAGTTTCGAAACCGACGATGCTGCAGATCGAAGATGCACTGGACGTATAACTGGAGTTGGAGATGTGGATCCTATCAGATGGCCTGGGTCAAGGTGGAGGTCCCTTGTGGTGAGGTGGGACGATGTCGAAACTAAAAGACATGGCAGGGTTTCCCCGTGGGAGATCGAGCCCTCAGGTTCTGTTTCTGTGGCTAGCAACTTGGTTCCACCGGGTTTAAAAAGGACCAGGATTGGGCTCTCTCCCACAGAACTAGAGTTTCCAGCTCCAAATGGAATTGGAGCATCAGACTTTGGGGAATCATTAAGATTCCAGAAGGTCTTGCAAGGTCAAGAAATTTTAGGTTACAGTACTCCCATTGATGGCGACGACAACATTCGTCATCCACCGGAGAAGAGGAGATCATTTCCTGGTTTACACGGTTCGGGGATAGCTCTAATGAGAAATGGTCCAAGAATCCCAGTTACCAACTCTGAAACTTCCTCCCGGGGTTTCATGTTTGATGAATCCTTCCAATTCCATAAGGTCTTGCAAGGTCAAGAAATATATCCTAGTCCATTTTTTGGAATAGCCACTGCCACCAATGAAGTCAAGGCAAGTGGTGGTTATGGTCCTGTGGACAGTGTTCCACTGTCCAGATCTAAAGATGGATGGCCGATTACAATGCAGAGTGAAAATTTCCTCACACGCTCTTCCATTCCTTCTGTACAAGTCTCATCACCATCATCTGTGTTCATGTTTCAGCAGTCAATGGTTCCTGTTCAAAGCTTTAATTCATATAACCGTGGCAACTTCACAGAACAGAGGACTATGAACAAGAGTACCTCCCATAATTCTGGGACAGCTTTTATGACTACTTCATTGGGCGTGCAGAAGCAGCTCGCCCTATCACATCCTTCTACAACAGAACCAGCGTTTACTGGCAATAAAGCTGAATGTAGATTGTTTGGTTTTTCATTAACAGAAGGAAAGAATGTTGGGAATACAGACAAGGCTTCTCCAGCAACAACTCCAATTAATGCAGGAACTACCTCTGTGTTGTCCTCCAATAGTGGACTACGTTGTCCTTTGGAGTCTCCACTGATGAGCAAGGTGGTTGGAAGCAACTGTACCAAAGTAAGTAACTTATCTGCTCGCGCTGTATAG 2118 47.26 MAALIDLNTTEEDDAPSSAASSASSSSASALTSSPSPSLTSSICLELWHACAGPLTSLPKKGSLVVYFPQGHLEQMQEFPATAAYDLPPHILCRVIDVQLHVRAEAGSDEVYAQVSLFPENEPIEHKMQEEMTNDSEGEDFEGSEKTTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLLGIKWKFRHIYRGQPRRHLLTTGWSAFVNKKRLVSGDAVLFLRGNDGELRLGIRRAAQLKSGSAVSNICSQQLNSSSIMDVVNAISSKTSFSVYYNPRATSSQFVLPFHKFLKSINHSFSAGMRFSLSFETDDAADRRCTGRITGVGDVDPIRWPGSRWRSLVVRWDDVETKRHGRVSPWEIEPSGSVSVASNLVPPGLKRTRIGLSPTELEFPAPNGIGASDFGESLRFQKVLQGQEILGYSTPIDGDDNIRHPPEKRRSFPGLHGSGIALMRNGPRIPVTNSETSSRGFMFDESFQFHKVLQGQEIYPSPFFGIATATNEVKASGGYGPVDSVPLSRSKDGWPITMQSENFLTRSSIPSVQVSSPSSVFMFQQSMVPVQSFNSYNRGNFTEQRTMNKSTSHNSGTAFMTTSLGVQKQLALSHPSTTEPAFTGNKAECRLFGFSLTEGKNVGNTDKASPATTPINAGTTSVLSSNSGLRCPLESPLMSKVVGSNCTKVSNLSARAV 705
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1040486 1044878 + Carg07757-RA Car07g00181 151415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00181 705 MobiDBLite consensus disorder prediction 1 36 - -
Car07g00181 705 MobiDBLite consensus disorder prediction 11 36 - -
Car07g00181 705 Pfam Auxin response factor 280 360 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Car07g00181 705 Pfam B3 DNA binding domain 153 254 IPR003340 GO:0003677
Car07g00181 705 ProSiteProfiles B3 DNA-binding domain profile. 153 255 IPR003340 GO:0003677
Car07g00181 705 MobiDBLite consensus disorder prediction 651 675 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g01160 Car07g00181 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00181 Car-Chr7:1040486 Car20g00416 Car-Chr20:2338120 5.67E-141 dispersed
Car03g01160 Car-Chr3:9254689 Car07g00181 Car-Chr7:1040486 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3796 PF02362 B3 1.90E-21 CL0405 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00181 K14486 - csv:101220018 1124.0