Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00186 ATGGCGTCGCAGTTGCTCTCACGCGCCACTTACTTCGCTGGCGGCATTCCCAGTCTCCGCAAGTTGCACAGAGAGACCACCACCACTAACAACCACGTCGCCTTCGTCCACACCAGGCCCATCGCCGAGGGAGCCAACTTGATTTGGGGACGCCAATTGCGGCCGTCTCTGCTTCTCGATAACCTCTCGGCCAAACGGGAGACGGTTCGGCCTACCTATGCCGCAGCCTCCTCTTCTCCCGCGGGAGGTAGCGATTCTGCCGGGGAGGCGAAAGTTGCCCCGGCTGGTTTCTTCGAGAAGTATCCGGCGTTGGTCACCGGATTCTTCTTCTTCATGTGTTTTGTATCCGTGATCCATTTGTTGGTTGGGGTGGTGTACTGCTTGATAAGCTGGGTTGTGGGTCTCCCCAAGCGAGCGCCCATTGACTCAACACTCCTGAAGCTGCTGATCCCTGTAGCTTTCTGTCATGCACTTGGCCACGTCACTAGCAATGTCTCATTCGCAGCTGTTGCTGTCTCATTCACACACACAATCAAAGCTTTGGAACCGTTCTTTAACGCCGCCGCTTCTCAATTCATATTGGGGCAATCCATTCCCATTACCTTGTGGCTTTCATTGGCTCCCGTTGTCATTGGTGTGTCAATTGCATCTTTGACTGAGCTTTCATTCAACTGGACTGGCTTCATTAGTGCTATGATTTCTAATATCTCATTTACCTACAGAAGTATTTATTCAAAGAAAGCCATGACTGACATGGACAGCACCAACGTCTATGCCTATATTTCTATCATCGCTCTCCTTTTCTGCATTCCACCAGCTGTAATTGTGGAGGGGCCTCAACTGCTGAAGTTTGGTTTCAATGATGCCATAGCTAAAGTTGGTCTAACCAAATTCGTCTCAGATCTCTTCTGGGTGGGAATGTTTTATCACCTTTACAATCAGTTAGCAACCAACACACTGGAGAGGGTGGCACCACTTACCCATGCAGTTGGAAATGTGCTGAAACGTGTATTTGTGATTGGATTCTCCATCATTGTCTTTGGTAACAAAATTTCAACACAGACTGGTATTGGAACCTGCATTGCAATAGCAGGAGTTGCACTTTACTCTTTCATCAAGGCTAAGATGGAAGAAGAGAAACGAAGTATATGTCTTAACAAGTTGAGTTGTGCTCGTTTAGTTGTTTTTTCTTCCTTCTCCCTGAACGGAGTCTTAATTGTTTTCACAGCGAACAAAGGTCGCTTGAAGAAGCAGCATTGGAGGGTTTGGGTGTTCTTCTGTGTTTTCTTCTATTCTTTTCTCCGATTTTCACCTTCTAATTCGATGGAAGCTGCTGCTTCCGACGGCGGAAATCACAACCTGAATAATGATAATATTAACAAAATTAGTAACTCAAGTGAGGGTCTTAGCAGGCCCAAGCGCCAGATGAAGACTCCATTTCAGCTGGAAACCCTCGAGAAGGCCTTTGCTTTGGAGACATATCCATCAGAGTCGACGAGGGCTGAACTGTCGGAGAAATTGGGGCTCACCGATCGGCAATTGCAGATGTGGTTTTGTCACAGGAGGTTGAAAGACAAGAAGGAACCGGCGAAGAAACCACGAAATGTGGTACCGGCGTTGCCTGATTCTCCCATTGACGAATTGAGAGTGGTAACCGAGCCGGGTAGTGATTACGCTTCAGGGTCGGGCTCGGGTTCAAGTCCATTCGGTGATGTTGGGCTGCGTAATGTGGCGTCTGGAAGTGGTGGAGAAGATATGCCGATGACGAGAAGGTATTACGAACCTTCAAGGTCCATTATGGAACTTAGAGCCATTGCTTGTGTGGAGTCGCAGTTAGGCGAGCCATTGAGGGAGGACGGACCTATTATTGGGATTGAATTTGATTCATTACCACCTGATGCTTTCGGAGCACCTCTAGGTGGCCAAGATATTGAGGTTGGTGTGGTGCGAGTTGCCTCTGTGGATTGGAGATACATTCTTGATCAAGTTTTCACTATTGAGAAGGCTATTGAGGATTTGGCTGAACAGCAGAAGCGATCTGGACATTTGTATGGGGACAAATATGATCAACGGGATGCAAAATCAAATAAAGCTCTTCCAACAGTGGGGTCGGTTCTTCCTTATAAACAGCAGGCAACTGCAAGGGCATTCCCGGAATATTCATTTATGCCAGACCAGTCTAGAATTAGAGCTGATGCTTATGGACCAGTTGCCCAATCACATTATCCAGATTCATTAGTCGAGGTTTCAGCAGCCAGGACTCCATCATTTTTGCTTGGTCGTGAACAGTTGAATAGGAGCCATAATTATCATGGTCAGGTCTCAAGGGTTCGTCTTCTGTCTCAACAGGAGCAGCAAGGAGTTGCAGTTCCATCTCCTGCTGATGATAACACATTTGTTCCTGCAAGTATCAGGAATCCAATTGTTGTACAAGAAGATTCGTATATGTTACCTGATGGGCAAGTTTTCCCAAATGATGTCATCATTAGGATGGAAAGAAAACGCAAGAGTGAAGAAGCTCGTCTGAACAAAGAAGCTGAAGCCCATGAGATAAGAATGCGAAAAGAGCTTGAGAAACAAGACAATTTGAGGAAAAAGAGTGAAGAGCGAATGAGGAAAGAAATGGAAAAGCAAGATCGTGAAAGAAGGAAAGAAGAGGAGAGGTTACAGCGAGAAAAACAGCGAGAAGTAGAAAGGTTGAAGCGTGAGGAAAGACGTGAACTTGAACGGAGGGAAAAGTTTCTGCAGAGGGAGTATTTGAAGGCTGAGAAGAGGAGGCAAAAAGAAGCTATTCGCAAGGAAAAGGAAGCAGTGAGACGCAAAGCTGCTATTGAGAAGGCTACTGCACGTAGAATTGCTCGTGAGTCTATGGAACTTATTGAGGATGAACAGCTTGAACTGATGGAAATAGCAGCTGCAAACAAAGGATTATCCTCCATATTAAGTCTTGATCATGACACTTTGCAGAATCTCGAATCTTTCCGAGATTATCTAGGTGCATTTCCACCCAAGTCTGTGCAATTGAAAAAACCTTTCAGCATTCAGCCTTGGATCAATTCAGAGGAGAACATTGGTAACCTTCTCATGGTCTGGAGATTTTTTATTACATTTTCTGATGTTCTAGAGCTATGGCCCTTTACTCTTGATGAGTTTGTTCAAGCTCTTCATGACTATGATTCAAGATTACTGGGTGAGATTCACATTTGTCTTCTGAGACTGATTGTAAAAGATATTGAAGATGTTGCAAGAACACCTTCTGCAGGATTGGGAATGAATCAGAATGGTGTTGCCAACACTGGAGGTGGACATCCACAAATTGTTGAAGGGGCATATGCGTGGGGGTTTGACATTTGCAACTGGCAGAAACATTTAAACCCATTAACATGGCCTGAAATATTTCGACAACTAGCATTATCAGCTGGATTCGGACCTCAGTTAAAGAGGAGTTTGGCATGGTCTGAAATGCGTAGCAATGATGAGGCTAAATGTGGTGAGGATGTAGTTTCTACTCTTCGCAATGGTTCAGCAGCTGAAAATGCATTTTCTATCATGCAAGAGAAGGGTTTGTTAGCTCCTCGAAGATCTAGGCATCGGCTCACTCCTGGAACTGTCAAATTTGCTGCTTTCCATGTCCTTTCACTAGAAGGCAGTGAGGGGTTAACAGTACTAGAACTTGCAGAGAAGATACAGAGATCTGGACTTAGAGATCTGTCTACAAGCAGAACACCAGAGGCTTCTATTTCTGTTGCTTTGACGAGGGATACTAAGCTTTTTGAAAGAATAGCTCCTTCTACATATCGTGTACGAGCTCCCTATAGGAAGGATCCAGATGATGCCGAGGACTTACTTTCAGTAGCCAGAAAGAAGATTCAGGTATTCCAGAATGGGTTTTTGGCTGGAGAAGATGCTGATGATGTTGAAAGAGACGAAGAATCTGAATGTGATGATGTTGATGAAGATCCTGAAGTTGATGATGTAGCGACAACATCTTTGATGAATGAAGATGTTAGCAAAGGAGATGCTAACCTGAGAGTTGAGAATGAAAACTCATGTCATGATATTGATGGAAATCCACAAAATGAGATTGCCAAAAATATACCATCGTCTCCCCTAAGTGGCTCCAAGGACACAAAATATTTAAATATACCTACAGAGCAACATGCTGCTGTTGATGGGACTACTGTTACTGATCTTGATCAAGAAAATATGGAGATTGATGAGAGCAAGGAAGGTGAATCATGGATTCAAGGACTTACAGAAGGTGAATATCATGATCTTAGTGTTGAGGAGCGGTTGAATGCCCTTATCGCCTTAACCAGCATCGCAAATGAAGGAAACTCAATTCGCCTTGTTCTTGAGGATCGCTTGGAAGCCGCGAATGCTGTTAAGAAGCAAATGTTGGCTGAGGCTCAGATTGATAAATCTCGCCTGAAAGAAGAAATCATTACTAAATCAGATTTTCCAATTCACATTGTGAGCAAGGTGGAAACTGAACTCAACGGTTCCGCTATGGAGGATGGCCAAAGCCCTTTTCCTGTTGCTGACAATCAGAACAATGAAACAACCCTTTGCACTGCAGAAAACCTTGGTAGTGTGCCTAATGAGAGGGCTACTTTAGTGCCAGATTTTTTCCCAGTCCCAGATAACTTTTTGGCTCAACAATGTGGACATGCTTCAAAGAGGTCACGTTCACAGTTAAAATCTTATATTGCCCACAGAGCAGAAGAAATGTACACTTACAGGTCCTTGCCTCTAGGTCGAGATCGTAGGCGTAATCGATACTGGCAATTTGTTGCATCTTCTTCAAGCAATGATCCTGGTTCTGGGAGAATCTTTGTAGAAATGTATGATGGAAAATGGATGCTTATTGATTCTGAAGAGGGCTTTGATGCTCTTTCAATGGCTTTGGACACACGTGGGGTTAGAGAATCACACCTACGCATAATGTTGCAAATGATAGAGACATCATTCAAGGAAAATGTTAGGAGGAATCTTCAGTGTGTCAATGTGATGGTTCAAAGTCGAATTACTCCTAAAAATGAAAACGATGAATCAAGCTCTAGTCCTGATTGCAATGCCAGTTTTAACAGTCCTAGCAGCACTGTTTGCGGTTTAAATTTGGATACAACGATAACATCATCTTCATTTAGAATTGAGCTCGGGAGAAATGAAAATGAAAAGAAGGCTGCATTTAAAAGGTATCAAGACTTGCAGAGGTGGATGTTAAGAGAGTGCTTTAGCACATCAACATTATGTGCCATGGAGTTTGGAGAAAAAAGGTGCACGCCGCTGTTGGACATTTGCGATTCTTGTCTGTGCTTGTTTGATTCTCAACATTCTCACTGCTCTTCGTGCCATCAAACTTATGGCACTAGTGAGAACGATACTAATTTTCTGGAACACGAATGTCACTGTACGAGGGAAAGGAAGTCTTACCATTGGGATACACATGCATTAGATGCATCTCTTCCCCTCAAAAGTAGATTGCTCAAGGCCCTCTTAGCTTTCATTGAGGTACATGTTCCTTCAGAAGCTTTTCAATTATTTTGGACAGAACATAGGAAAGATTGGGGTGTCAGGATGAAATTATCTTCAACTATTGAGGAACTACTACAGATTTTGACCCTGTTTGAAAGTGTAATTAAGCGAGACTTCCTAAAATCAGACTTCACTACAACAGACGAACACCTGAGCTCATGTTCCATCTCTAGGAATGTTATACATGACGCAGCAGATATTGGGTCTGTTCTGACATTACCATGGATTCCACGGACTAGCGCAGCTGTTGCTTTAAGGCTTTGTGAGATAGATGTATCAATTTATTATATCGGGTGTGAGAAACCAGAGCCTGACCAGTATAAGGAAATCGGAGAACATGTAAACTTTCCCAGCAGATTTGTCCAGATTAAGAATGAAAACGAACTGGACTATGATGGTCTAATGAAGCAAGAAAACTTGGCTGATCCAAAAAGTTTAAGGAACAGCTACAAACGTGGTCGAAGGAGTCGAGATCATGGACGTCGTAAAAGGTGGCAGAAAAAAGTTAATGGTTCCAAACCTAGCCGTGTTCGGCCAAATGTGAAGAGTAATGAGAAGATGAATGAAGAACAGAGGGAACTGGGGCAAGGAATGCAGGTTTTGGGGGTACGGGGTCCCCGTACTGTAAGGAAGCGAAGGGCTGAGAATAGCATTCCAGATGAAGGATTGTTGGGGCTGGTGCCTAGTAGTAGTACTCAGAATATAGATGAATCTCCAAAAGACTATATTGGGGAATGGGAGGATGAAAAAATGGATAGGTTCGTGGATATGGAAGATGATGAGAATGTGATGGAAGATGGAGAGAACGAAGAGGATGAAGAGAATGTAAACAACGTAGAACCAATGGACTCAGACGAGGATGCTCAGGAAGTTGGATATGAGCAAGGGAGTTGGGAGTATGGTATTGACAATGGCACCTCCAACAGATGGAATGGTGATTTAGGGGTGGCTAGTGATGAGGAGGATGTGGAGTTATCTGAGGACTACAATGGCACTGAAGAGGGGGGAAATGATTTTGGGGAGGAAGAGTTAGATGATGATACGAGCGTGGAGTCGGATTGTTCACCAAATAGGATAGGCAATAACGGTGGAAGAGAATCCCCTGTTTCCGACGATTATAGTGATTAA 6666 43.94 MASQLLSRATYFAGGIPSLRKLHRETTTTNNHVAFVHTRPIAEGANLIWGRQLRPSLLLDNLSAKRETVRPTYAAASSSPAGGSDSAGEAKVAPAGFFEKYPALVTGFFFFMCFVSVIHLLVGVVYCLISWVVGLPKRAPIDSTLLKLLIPVAFCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPITLWLSLAPVVIGVSIASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNVYAYISIIALLFCIPPAVIVEGPQLLKFGFNDAIAKVGLTKFVSDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTGIGTCIAIAGVALYSFIKAKMEEEKRSICLNKLSCARLVVFSSFSLNGVLIVFTANKGRLKKQHWRVWVFFCVFFYSFLRFSPSNSMEAAASDGGNHNLNNDNINKISNSSEGLSRPKRQMKTPFQLETLEKAFALETYPSESTRAELSEKLGLTDRQLQMWFCHRRLKDKKEPAKKPRNVVPALPDSPIDELRVVTEPGSDYASGSGSGSSPFGDVGLRNVASGSGGEDMPMTRRYYEPSRSIMELRAIACVESQLGEPLREDGPIIGIEFDSLPPDAFGAPLGGQDIEVGVVRVASVDWRYILDQVFTIEKAIEDLAEQQKRSGHLYGDKYDQRDAKSNKALPTVGSVLPYKQQATARAFPEYSFMPDQSRIRADAYGPVAQSHYPDSLVEVSAARTPSFLLGREQLNRSHNYHGQVSRVRLLSQQEQQGVAVPSPADDNTFVPASIRNPIVVQEDSYMLPDGQVFPNDVIIRMERKRKSEEARLNKEAEAHEIRMRKELEKQDNLRKKSEERMRKEMEKQDRERRKEEERLQREKQREVERLKREERRELERREKFLQREYLKAEKRRQKEAIRKEKEAVRRKAAIEKATARRIARESMELIEDEQLELMEIAAANKGLSSILSLDHDTLQNLESFRDYLGAFPPKSVQLKKPFSIQPWINSEENIGNLLMVWRFFITFSDVLELWPFTLDEFVQALHDYDSRLLGEIHICLLRLIVKDIEDVARTPSAGLGMNQNGVANTGGGHPQIVEGAYAWGFDICNWQKHLNPLTWPEIFRQLALSAGFGPQLKRSLAWSEMRSNDEAKCGEDVVSTLRNGSAAENAFSIMQEKGLLAPRRSRHRLTPGTVKFAAFHVLSLEGSEGLTVLELAEKIQRSGLRDLSTSRTPEASISVALTRDTKLFERIAPSTYRVRAPYRKDPDDAEDLLSVARKKIQVFQNGFLAGEDADDVERDEESECDDVDEDPEVDDVATTSLMNEDVSKGDANLRVENENSCHDIDGNPQNEIAKNIPSSPLSGSKDTKYLNIPTEQHAAVDGTTVTDLDQENMEIDESKEGESWIQGLTEGEYHDLSVEERLNALIALTSIANEGNSIRLVLEDRLEAANAVKKQMLAEAQIDKSRLKEEIITKSDFPIHIVSKVETELNGSAMEDGQSPFPVADNQNNETTLCTAENLGSVPNERATLVPDFFPVPDNFLAQQCGHASKRSRSQLKSYIAHRAEEMYTYRSLPLGRDRRRNRYWQFVASSSSNDPGSGRIFVEMYDGKWMLIDSEEGFDALSMALDTRGVRESHLRIMLQMIETSFKENVRRNLQCVNVMVQSRITPKNENDESSSSPDCNASFNSPSSTVCGLNLDTTITSSSFRIELGRNENEKKAAFKRYQDLQRWMLRECFSTSTLCAMEFGEKRCTPLLDICDSCLCLFDSQHSHCSSCHQTYGTSENDTNFLEHECHCTRERKSYHWDTHALDASLPLKSRLLKALLAFIEVHVPSEAFQLFWTEHRKDWGVRMKLSSTIEELLQILTLFESVIKRDFLKSDFTTTDEHLSSCSISRNVIHDAADIGSVLTLPWIPRTSAAVALRLCEIDVSIYYIGCEKPEPDQYKEIGEHVNFPSRFVQIKNENELDYDGLMKQENLADPKSLRNSYKRGRRSRDHGRRKRWQKKVNGSKPSRVRPNVKSNEKMNEEQRELGQGMQVLGVRGPRTVRKRRAENSIPDEGLLGLVPSSSTQNIDESPKDYIGEWEDEKMDRFVDMEDDENVMEDGENEEDEENVNNVEPMDSDEDAQEVGYEQGSWEYGIDNGTSNRWNGDLGVASDEEDVELSEDYNGTEEGGNDFGEEELDDDTSVESDCSPNRIGNNGGRESPVSDDYSD 2221
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1059869 1076172 + Carg07762-RA Car07g00186 151420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00186 2221 MobiDBLite consensus disorder prediction 2163 2196 - -
Car07g00186 2221 Coils Coil 828 941 - -
Car07g00186 2221 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 1410 1450 IPR028942 -
Car07g00186 2221 MobiDBLite consensus disorder prediction 1303 1321 - -
Car07g00186 2221 MobiDBLite consensus disorder prediction 1300 1321 - -
Car07g00186 2221 MobiDBLite consensus disorder prediction 1351 1374 - -
Car07g00186 2221 Pfam DDT domain 1022 1077 IPR018501 -
Car07g00186 2221 ProSiteProfiles DDT domain profile. 1021 1080 IPR018501 -
Car07g00186 2221 Coils Coil 1460 1480 - -
Car07g00186 2221 MobiDBLite consensus disorder prediction 2058 2085 - -
Car07g00186 2221 ProSiteProfiles HARE-type HTH domain profile. 1202 1271 IPR007759 GO:0006355
Car07g00186 2221 MobiDBLite consensus disorder prediction 2108 2138 - -
Car07g00186 2221 Pfam Homeodomain 471 527 IPR001356 GO:0003677
Car07g00186 2221 MobiDBLite consensus disorder prediction 2199 2221 - -
Car07g00186 2221 MobiDBLite consensus disorder prediction 1996 2017 - -
Car07g00186 2221 ProSiteProfiles 'Homeobox' domain profile. 468 528 IPR001356 GO:0003677
Car07g00186 2221 MobiDBLite consensus disorder prediction 1678 1698 - -
Car07g00186 2221 MobiDBLite consensus disorder prediction 1980 2038 - -
Car07g00186 2221 Pfam Triose-phosphate Transporter family 111 370 IPR004853 -
Car07g00186 2221 MobiDBLite consensus disorder prediction 2108 2221 - -
Car07g00186 2221 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1581 1651 IPR028941 -
Car07g00186 2221 Pfam HB1, ASXL, restriction endonuclease HTH domain 1202 1270 IPR007759 GO:0006355
Car07g00186 2221 MobiDBLite consensus disorder prediction 1352 1374 - -
Car07g00186 2221 MobiDBLite consensus disorder prediction 835 899 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00186 Car-Chr7:1059869 Car09g01028 Car-Chr9:6967836 3.54E-69 dispersed
Car07g01239 Car-Chr7:7648362 Car07g00186 Car-Chr7:1059869 1.08E-09 transposed
Car18g01023 Car-Chr18:10615821 Car07g00186 Car-Chr7:1059869 5.01E-163 transposed
Car19g00696 Car-Chr19:8067077 Car07g00186 Car-Chr7:1059869 1.45E-156 transposed
Car20g00894 Car-Chr20:9416935 Car07g00186 Car-Chr7:1059869 1.18E-07 transposed
Car03g01154 Car-Chr3:9215317 Car07g00186 Car-Chr7:1059869 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3798 PF03151 TPT 1.40E-93 CL0184 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00186 - - cmo:103484497 2757.63