Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00203 ATGGAGAAGGAGGCTAATTCTTGGCTTAGGAGAACCAAATTCTCTCACACAGTTTATCATCGATGGGACTCGTTAAGATTGACCCCTGTTCCTTTCACCATCGAACCACCTCGCAATTCTGGCTTGAAATCGAGGCCTCAATCAACTTCATCACCCCAGAAACCAAATCCTGATATTTCGAAGATTCAACCAAGTTTCATATCCAACAAGAAGAGGTATCTGTCTCCTCTTCCCACCAGCAACCTCTCTGACGTTTTCAGGGAAGCAAAATCCGAGAGTAAGAGATTCTCAACTCCAACTCCTCGACTTAGAGAACAAACGAAGGAATTCAAGAACATGGACCCTCAAGTTTCTAAATCTGCCAATTTCAAGCCATCTTTGAATACCAGTCCACTGAAACACCTAGCTACGGCAAAACGAGGTGATAAGTCAAAGCCCCGGAAGGACTCATCCTGGACCAAATATTTCGAGTCCGGTGGTGGAAGAGTCACCGCAGTTGAAACGGTCGATGACTGGAGTGTTGATCTCTCCGAGTTGTTTCTCGGGTTAAGGTTTGCTCATGGAGCTCACAGTCGTCTTTATCATGGAAAATACAAGGACAAACCTGTTGCTGTTAAAATTATTCGACAGCCCGAGGACGACGAAAATGGAGTTCTTGCTTCGAGATTGGAGAAGCAATTCACCAGAGAAGTTTCCCTTTTATCTCGTCTCAATCATCCGAACGTTTTAAAGTTTGTAGCTGCCTGTAGGAAGCCACCAGTTCACTGTGTCATTACCGAATATTTGTCTCAAGGATCATTAAGAGCATACTTGCACAAACTGGAGCACCAATCTCTTCCTATGCGAAAACTAATTGCAATGGCTTTAGATGTCGCTCGTGGCATGGAATATATTCACTCACAAGGCGTGATTCATCGGGATCTTAAACCCGAAAATGTTCTTATTGACGAGGACTTCCACCTGAAAATTGCAGATTTTGGTATAGCTTGTCCTGATGCCTTTCTCGACCCATTGGCTGACGATCCTGGTACTTATCGATGGATGGCACCGGAGATGATTAAACATAAACCCTATGGTCGAAAGGTCGATGTGTACAGCTTCGGGCTTATGTTGTGGGAAATGGTGGCTGGTGCAATTCCTTACCAGGATATGACTCCCATTCAAGCAGCCTTTGCTGTTGTGAACAAGAATCTTAGGCCTGTTATCTCAAGTGATTGTCCGTTGGCTATGCGAGCACTGATCGAGCAATGCTGGTCTGTAAATCCAGAGAAGAGACCCGATTTCTGGCAGGTTGTGAAGGTATTAGAGAAATTCGAGTACTCGCTTGCCCATGATGGGACACTGAATTTAGTAGGAAATCCTCTGTCTAGTTTTCATCTAGACCATAAGAAAGGAGGGCCACTCCATTGGATTCAAAAGCTTGGCCCCCTACATCTTGAACCCTCACCCCGCCCCAAACCCAAATTCTCATAA 1473 45.01 MEKEANSWLRRTKFSHTVYHRWDSLRLTPVPFTIEPPRNSGLKSRPQSTSSPQKPNPDISKIQPSFISNKKRYLSPLPTSNLSDVFREAKSESKRFSTPTPRLREQTKEFKNMDPQVSKSANFKPSLNTSPLKHLATAKRGDKSKPRKDSSWTKYFESGGGRVTAVETVDDWSVDLSELFLGLRFAHGAHSRLYHGKYKDKPVAVKIIRQPEDDENGVLASRLEKQFTREVSLLSRLNHPNVLKFVAACRKPPVHCVITEYLSQGSLRAYLHKLEHQSLPMRKLIAMALDVARGMEYIHSQGVIHRDLKPENVLIDEDFHLKIADFGIACPDAFLDPLADDPGTYRWMAPEMIKHKPYGRKVDVYSFGLMLWEMVAGAIPYQDMTPIQAAFAVVNKNLRPVISSDCPLAMRALIEQCWSVNPEKRPDFWQVVKVLEKFEYSLAHDGTLNLVGNPLSSFHLDHKKGGPLHWIQKLGPLHLEPSPRPKPKFS 490
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1135574 1138004 + Carg07780-RA Car07g00203 151437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00203 490 MobiDBLite consensus disorder prediction 40 63 - -
Car07g00203 490 MobiDBLite consensus disorder prediction 136 152 - -
Car07g00203 490 MobiDBLite consensus disorder prediction 89 112 - -
Car07g00203 490 ProSiteProfiles Protein kinase domain profile. 179 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00203 490 ProSitePatterns Serine/Threonine protein kinases active-site signature. 303 315 IPR008271 GO:0004672|GO:0006468
Car07g00203 490 MobiDBLite consensus disorder prediction 89 152 - -
Car07g00203 490 MobiDBLite consensus disorder prediction 113 133 - -
Car07g00203 490 Pfam Protein tyrosine and serine/threonine kinase 185 435 IPR001245 GO:0004672|GO:0006468
Car07g00203 490 MobiDBLite consensus disorder prediction 30 63 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00203 Car-Chr7:1135574 Car18g00156 Car-Chr18:842274 1.17E-116 dispersed
Car13g00524 Car-Chr13:7267270 Car07g00203 Car-Chr7:1135574 5.59E-37 wgd
Car18g00352 Car-Chr18:2176811 Car07g00203 Car-Chr7:1135574 0 wgd
Car03g01137 Car-Chr3:9152517 Car07g00203 Car-Chr7:1135574 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88967 PF07714 PK_Tyr_Ser-Thr 5.50E-61 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00203 - - csv:101204268 832.017