Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00242 ATGGGGTCCAAACTGGCGGGCAATAACGGTGGGACCCAGCGGAAAAGAATACAGACAAAGGCGTTTAATGAAAGCGCGGATCTTGCATTGTCTACACCAAAGACGACAGACGTTGTTTTGGGTCAGAAGCCAAGCCCAGATACAGATACCCAACAGCAAGGCTTGGGTTGTTCGAGTGAAGCCATGAATTGTGGCCAAGAATCTGCCCGAGATTCAGTAAGAAGGGATCAGAAAATGACGTGCAAGGCAGGAAGGCGGCTGGGCGTTTCGAATTGCTTGCTCCCTCGGGAAGAAGAACTAGGAAGCCACAATTCGATTGAACGTTTTGCTGAACTTGGGCTCGGGCCAGTTCCATTTTGGGCTTTGCGAGTGATTTTCGTCGGCCTGAAACCAGTGTCAGGCTGTATTTCTGTTCAGAGAGATCTTGATATGGGTGGAAATTGCAGGACGTTTGTTGGGTTTCTTCTGTTCTTCGTCATTTCATTCTTCCTCTGTTCTTCTCCTTTGTTTTGTGACGCTGCGAGTTCAATCACAAGGGGGATAGGTTTAAGAGACAGTAATAACGAGACCCTCATATCCGAAAATGAGTCCTACGAGATGGGTTTCTTCAGCCCTATAAATTCTTCATCACGATACGTTGGTATATGGTATCACAAGATCCCGGAACAGTCTGTTATTTGGGTTGCAAATAGGGACCAGCCACTTCTGAATAGAGATGGGGTTTTGAAGATCGGAGACGATGGGAACTTGATCATTCTAGACGGCAACAACGTGTCTGTTTGGACAAGCAATATCACAGCGAATGCGTCTGATCTGAGGAACTTAACTCTGGGTAAAAATGGAGAATTGATTCTCTCGACCCACGACGAGCCGTCGAAAGTCCATTGGAGCAGCTTCGAACACCCCACAGATACATTTCTTCCAAATATGGTGGTGAAAGTGAACTCTGATTTGGGTGAGAAACGGATTTTTAGGTCGTGGAAATCAGAGACAAATCCGGCCGTCGGAAATTACAGTTTGGGTGTGGATCCTCTTGGAGCCGTACAGATTGTCATTTGGAATGGGAAAGATCGATGGTGGAGAAGCGGACACTGGGATAAGCAGATTTTTTCAGGGGTTCCGACCATGCGCTCAACGTCGTTGTATGGCTTCAAGGTTAACGCTGAGCGTCGAGACGAAATAACCTTGACTTTTCATCCATTGAATAACTCCGATAAGATGAAATTTCAAATACAGTGGGATGGTAAAGAAGCAGAGCAACGATGGAATGAAGCGAATCGCGTATGGGACACCATTCGTTTACTGCCTTCTAACGACTGCGATTTGTATAATTTTTGTGGGGATTTTGGGATTTGTTCTGAAACAAGTAGACCCAAGTGTAGTTGCCCTCATGGGTTTATACCCAAAAACAACGAGCAATGGAAGAGTGGGATTTGGTCAGATGGGTGTCAGAGGAAGACCCCGTTGCTTCAGCAGAGGATGAACAGTAGTTCGAATGGCACTGTTGAAGATGGTAAAGAAGATGGGTTTGTGGCTGTACAGTTCGTGAAATTGCCTGATTTCATAACTGCAGTGTTTGTGGACTCTTGTGGAGATGAATGTTTGAACAGCTCTTCGTGTGTTGCATATTCGGATGCTCATGGAATTGGGTGCCTTACTTGGGATGGTCCCTTAATTGATATTCAGAAATTTGATGGCGTTGGGAATACTTTGAACATTCGTCTCGCTCATTCTGATTTGATATCTGTAGATAACGAGAGCAAATTGTCGACCGCTGCGATAGTATTGATATGTTTAGGAGGAACAGTTGTTATAGCTATGTTAGCATTGCTGCTATGGAAATTCAGAGACAAAATGAAAGGTTCAGCAGCAGCTGCTTCGAGTAAAACACAGAACAACAATGAAATGTTTGACCTGAGCAAGAGCAAAGAATTTTCAGCAGAGCTTTCAGGGCCATACGAATTAGGAAGAGAAGGCGAACAATTGAGTGGACCAGATTTGCCAATGTTCAATTTCAACTGTATAGCAACGGCTACTGGTAACTTCTCCGAGGCAAACAAGCTTGGTCAGGGAGGTTTCGGCCCAGTCTACAAGGGAAAGCTTCCATGTGGCCTAGAAGTTGCTGTGAAGAGGCTCTCAGTCCGGTCTGGCCAAGGTCTAGAAGAGTTTAAGAATGAGATTATACTGATAGGAAAGTTGCAGCACCGCAACCTGGTCAGGCTGTTGGGCTACTGCATTCAAGGAGAGGACAAGATGCTGCTCTATGAATATATGCCAAACAAAAGCTTGGATTGGTTTCTTTTCGATCCAGTTAAGCAGGTACTCCTGGATTGGGAAAAACGGTTGTCAATCATGGAGGGGATTGCACGAGGACTGCTATATCTTCATCGAGACTCGAGACTATTAATCATTCATAGAGATTTGAAAGCCAGCAACATTTTGCTAGACGAAGACATGAATCCAAAGATATCGGACTTTGGCATGGCTAGAATATTTGGTGGAAACCAAAACGAGGCAACAAATACAATTCGAGTTGTTGGCACCGGTTACATGGCTCCCGAATATGCAATGGAAGGTTTATTTTCGGTGAAATCAGATGTCTATAGTTTTGGTGTATTATTATTAGAGTTAATATGTGGTCGGAGGAACACTAGCTTTCGGTCAACCGAGTACTTAACCCTTATCAGCTATGCATGGAATCTTTGGAATGGAGGAAGAGCGATCGAACTTCTCGACCCGTCCATTCGGGATTCATCCCGAGAGGAGGAAGTATTGAAATGCATACATGTAGCAATGTTGTGTGTACAAGACTCCCCAGCATATAGACCAACAATGCAGTCCTTGGTGCTAATGCTGGAGAGTGAGTCTGCATCTCTTCCACAACCAAGACAACCTACCTATACTTCCACAAGAGCCTCGATCGACATCGACTTGTTTACCGATGGCCATGACGTTGTATCATCGAACAACGTAACAGTGACAATGGTGGAGGGTAGATAG 3000 44.93 MGSKLAGNNGGTQRKRIQTKAFNESADLALSTPKTTDVVLGQKPSPDTDTQQQGLGCSSEAMNCGQESARDSVRRDQKMTCKAGRRLGVSNCLLPREEELGSHNSIERFAELGLGPVPFWALRVIFVGLKPVSGCISVQRDLDMGGNCRTFVGFLLFFVISFFLCSSPLFCDAASSITRGIGLRDSNNETLISENESYEMGFFSPINSSSRYVGIWYHKIPEQSVIWVANRDQPLLNRDGVLKIGDDGNLIILDGNNVSVWTSNITANASDLRNLTLGKNGELILSTHDEPSKVHWSSFEHPTDTFLPNMVVKVNSDLGEKRIFRSWKSETNPAVGNYSLGVDPLGAVQIVIWNGKDRWWRSGHWDKQIFSGVPTMRSTSLYGFKVNAERRDEITLTFHPLNNSDKMKFQIQWDGKEAEQRWNEANRVWDTIRLLPSNDCDLYNFCGDFGICSETSRPKCSCPHGFIPKNNEQWKSGIWSDGCQRKTPLLQQRMNSSSNGTVEDGKEDGFVAVQFVKLPDFITAVFVDSCGDECLNSSSCVAYSDAHGIGCLTWDGPLIDIQKFDGVGNTLNIRLAHSDLISVDNESKLSTAAIVLICLGGTVVIAMLALLLWKFRDKMKGSAAAASSKTQNNNEMFDLSKSKEFSAELSGPYELGREGEQLSGPDLPMFNFNCIATATGNFSEANKLGQGGFGPVYKGKLPCGLEVAVKRLSVRSGQGLEEFKNEIILIGKLQHRNLVRLLGYCIQGEDKMLLYEYMPNKSLDWFLFDPVKQVLLDWEKRLSIMEGIARGLLYLHRDSRLLIIHRDLKASNILLDEDMNPKISDFGMARIFGGNQNEATNTIRVVGTGYMAPEYAMEGLFSVKSDVYSFGVLLLELICGRRNTSFRSTEYLTLISYAWNLWNGGRAIELLDPSIRDSSREEEVLKCIHVAMLCVQDSPAYRPTMQSLVLMLESESASLPQPRQPTYTSTRASIDIDLFTDGHDVVSSNNVTVTMVEGR 999
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1321089 1325998 + Carg07820-RA Car07g00242 151476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00242 999 Pfam Protein tyrosine and serine/threonine kinase 685 950 IPR001245 GO:0004672|GO:0006468
Car07g00242 999 ProSitePatterns Serine/Threonine protein kinases active-site signature. 803 815 IPR008271 GO:0004672|GO:0006468
Car07g00242 999 Pfam PAN-like domain 506 561 IPR003609 -
Car07g00242 999 ProSiteProfiles EGF-like domain profile. 436 472 IPR000742 -
Car07g00242 999 ProSiteProfiles Protein kinase domain profile. 682 967 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00242 999 MobiDBLite consensus disorder prediction 1 63 - -
Car07g00242 999 Pfam S-locus glycoprotein domain 360 470 IPR000858 GO:0048544
Car07g00242 999 Pfam D-mannose binding lectin 225 328 IPR001480 -
Car07g00242 999 Pfam Domain of unknown function (DUF3403) 954 999 IPR021820 GO:0004674
Car07g00242 999 ProSiteProfiles Bulb-type lectin domain profile. 176 298 IPR001480 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00242 Car-Chr7:1321089 Car16g00582 Car-Chr16:3649898 0 dispersed
Car13g00563 Car-Chr13:7513416 Car07g00242 Car-Chr7:1321089 7.10E-48 wgd
Car18g00311 Car-Chr18:1868504 Car07g00242 Car-Chr7:1321089 8.12E-24 wgd
Car19g00748 Car-Chr19:8338962 Car07g00242 Car-Chr7:1321089 1.93E-142 wgd
Car03g00451 Car-Chr3:4958316 Car07g00242 Car-Chr7:1321089 3.64E-171 wgd
Car07g00242 Car-Chr7:1321089 Car09g00824 Car-Chr9:5016207 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88968 PF07714 PK_Tyr_Ser-Thr 2.70E-46 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00242 - - csv:101207147 1433.7