Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00243 ATGGCGGCTTCATATCCCGATGATTTCAAGTGCCCTATTTCTCTGGAGATAATGTCGGACCCTGTAATACTCTCCTCCGGCCACACCTTTGATCGCTCTTCAATCCAACGCTGGCTCGATGCCGGTCATCGGACTTGTCCAATCACCCAATTGCCCCTTCCTGAAAACCCTTCTCTAATCCCTAACCATGCCCTCAGGAGCTTAATTTCAAATTTTAACCCTGTTTCCCTTTCCAAGCCATTTCTTCCTCATCCGCCGCCCCAAACCCTAATCTCGATTCTTATCTCTCCGTCTGCCTCCCTCGATTCTAAGCTCGATTGCCTCAATCAACTCGCCAGGGTGTCAAAGCGCGATTCCGTTATGCGAAGAAAATTGACCGAGTCTGGTGCCGTCTCGGCTGTTCTTAAATGCGTTGGTTCTGACGATCCGACCCTCCAAGAGAAGGCCCTGTCGCTGTTACTGAATCTTAGTTTGGACGATGATAACAAAGTGGGTTTGGTTGCAGAAGGGGCTATTGGTCTCACCGTCGCAGCTCTTCAAGCCAGGTCCCCTGATTGCAGAGCCGTAGCCGCCACGATGCTGACGAGCTTAGCCGTTGTGGAGGTCAACAAGGCTACAATTGGGGCATATCCCTACGCGATTCGCTCTCTTGTTGGTCTCTTACGATACGGCAACAACAGAGAGCAGAAGGAAGCAGCAACAGCGCTTTACGCCATCTGTTCATACCCTGGGAACCGTGTACGGACTGTGGAATGTGGGGCTGTTCCAATTCTGCTTGAAATTGCCAATTCGGGGCTGGATAGAGCAGTGGAGGTTCTGGGGCTTTTGGCCAAGTGTAGAGAAGGTCGAGAAGAGATGCAACGGTTCCACGGAAGTATGGAGATTTTGGGACGTGTGTTGAGAAATGGAGCCCCAAGAGGAGTTCAATACGCTCTTCTAACGCTGATTTCGCTCTGCTGCCATAGCGAGCGAGCGTGCGTGGAAGCCAGAAGAGAAGGCGTTTTGGGAATCTGTATGACATTGATTGATGACGATAACGAAAAGATCAGAGCAAATGCTGCAAAATTGATTCATATACTGCGAGGAAACAACGCATGA 1098 50.36 MAASYPDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPENPSLIPNHALRSLISNFNPVSLSKPFLPHPPPQTLISILISPSASLDSKLDCLNQLARVSKRDSVMRRKLTESGAVSAVLKCVGSDDPTLQEKALSLLLNLSLDDDNKVGLVAEGAIGLTVAALQARSPDCRAVAATMLTSLAVVEVNKATIGAYPYAIRSLVGLLRYGNNREQKEAATALYAICSYPGNRVRTVECGAVPILLEIANSGLDRAVEVLGLLAKCREGREEMQRFHGSMEILGRVLRNGAPRGVQYALLTLISLCCHSERACVEARREGVLGICMTLIDDDNEKIRANAAKLIHILRGNNA 365
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1326806 1327903 + Carg07821-RA Car07g00243 151477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00243 365 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 129 171 IPR000225 GO:0005515
Car07g00243 365 Pfam U-box domain 6 72 IPR003613 GO:0004842|GO:0016567
Car07g00243 365 ProSiteProfiles U-box domain profile. 4 79 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00243 Car-Chr7:1326806 Car13g00102 Car-Chr13:732289 1.00E-59 dispersed
Car03g00452 Car-Chr3:4961677 Car07g00243 Car-Chr7:1326806 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00243 - - csv:101213883 635.565