Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00245 ATGGCAGAGGATTTTCAGGCTGCTATTTGCGGCGATAATTGGTGGAGCTCTTCACGAAACATGATGGTCACCGTCGGTGGCTTATCGCCCTGTTCCGTCGGGATCGGCGACCTAGGTTGGCCGCCGGCGGATGATTTCCTCGACATCAAGCCCAAGTCCGCAACTGATTCCGACCACAACAACAACAACAACAACTCCATGCTTTTTCAAGACTATTCCACCTTCCAAATGATGGGTTTTGCTCTCTCTTCTTCCACCACCTCCGATCATTGGAACCAACCTGATGGTTTACTTTGCGGCGGTGGGCGAGGTGAGAGCAACTTCAATTCGAATGGAATTGAGAGGTACAAAGATGAGGAAATTAAAACGAGTTTCACGTCTGATTCGAGCTTCATAAACGGATTGAAGCAAGGAGATGATGAAGATTACAACATGTTGGAGCAAAATGGTTTGATGTCTATTAACTGTTCATCCACAACCAACTCACCCACTTGCCAGGGTTTGTTTCCTCTTGACTCAACTTTATATGGATACCCCCATCAACAACAACAACAACAACCACCACCACATGCTCATTCCCTTTTCAACGCAACCCACCCTCACCCTCAGCCTGTTTCTGCCGCCTTGCACTTCGCCAATAACACTCCCTTTTGGAACGCCCCAACCGCAGCTTCTTCAACTCACATTCCACAGGGCATTGCTTCCTTACTTGAACAAAAGAGCGCCAAGCCTATCAATAATGGTAATTGTGAAAATGGTCAAGAACCCAAGAAATGTGACAAAAACAGCGCAAATGAATCAGCACCAGTGTTCAAAAGGCCTCGAATTGAAACTCCATCACCATTGCCGACATTTAAGGTGCGGAAAGAGAAGCTAGGGGACCGTGTGACTGCGCTTCAACAACTGGTTTCACCGTTTGGAAAGACCGATACTGCCTCAGTTCTTCACGAAGCCATTGAGTACATCAAGTTCCTCCACGATCAAGTCAGTGTCTTAAGCACTCCATATATGAAGAGCAACAATGGAATAACACCCACCCAACAACACCAACAGGTATGTGAAAAGGAAGACCCAGATTGCCCAAAACAAGATCTGAGAAGCCGAGGGCTTTGCTTGGTGCCGGTTTCAAGCACATTTCCGGTGTCCAATGTAGGCACGGCGGATTTCTGGACTCCGACGTTCGGAGGAACATTCCGGTGA 1200 47.67 MAEDFQAAICGDNWWSSSRNMMVTVGGLSPCSVGIGDLGWPPADDFLDIKPKSATDSDHNNNNNNSMLFQDYSTFQMMGFALSSSTTSDHWNQPDGLLCGGGRGESNFNSNGIERYKDEEIKTSFTSDSSFINGLKQGDDEDYNMLEQNGLMSINCSSTTNSPTCQGLFPLDSTLYGYPHQQQQQQPPPHAHSLFNATHPHPQPVSAALHFANNTPFWNAPTAASSTHIPQGIASLLEQKSAKPINNGNCENGQEPKKCDKNSANESAPVFKRPRIETPSPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVSVLSTPYMKSNNGITPTQQHQQVCEKEDPDCPKQDLRSRGLCLVPVSSTFPVSNVGTADFWTPTFGGTFR 399
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1335063 1336836 - Carg07823-RA Car07g00245 151479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00245 399 MobiDBLite consensus disorder prediction 245 282 - -
Car07g00245 399 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 276 325 IPR011598 GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00091 Car-Chr1:480926 Car07g00245 Car-Chr7:1335063 1.53E-32 dispersed
Car03g00660 Car-Chr3:5903069 Car07g00245 Car-Chr7:1335063 5.25E-34 dispersed
Car04g00871 Car-Chr4:5015921 Car07g00245 Car-Chr7:1335063 3.19E-65 dispersed
Car06g01427 Car-Chr6:10174160 Car07g00245 Car-Chr7:1335063 9.61E-32 dispersed
Car07g00245 Car-Chr7:1335063 Car16g00866 Car-Chr16:6444417 8.41E-57 dispersed
Car07g00412 Car-Chr7:2088734 Car07g00245 Car-Chr7:1335063 3.51E-31 dispersed
Car19g00430 Car-Chr19:6091901 Car07g00245 Car-Chr7:1335063 5.44E-31 dispersed
Car13g00566 Car-Chr13:7529039 Car07g00245 Car-Chr7:1335063 1.05E-49 wgd
Car03g00455 Car-Chr3:4971901 Car07g00245 Car-Chr7:1335063 7.60E-146 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00245 - - bhj:120072732 477.633