Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00252 ATGGCGACCCATGAGCCACTTCTTCCTCAACCCCCCAAAACTACCCGCCCTAAGACCTTCTTCACAGTCCTCTTTTTTTCTCTGCTTTTGTGCTCTGCCATTTTCATCACCAACAAGCTCATCAATTCAGACCCATCTGAAAATGGTCATCACCCCTTCCTTCATAACATCTGCAACATGGCTTACAACCAATCATCCTGCATTCAAATGCTCGCCTCTGAATTCCCCCTTCTTCAAGAAACCAAAACCACCAACGCGGCGAACTTCTTACAATCCTTCCTGAGGAAATCCACAAGCAAAATAGTCAACACCATCGAGAACGCCAAAGATCTCCGCCGTCGAATCAACAACCCACGCGGTGAAGCAGCTTTGGCCGACTGCGTCGAGCTCATGGAGATCTCAATGGATCGAATAACCGACTCGATTTTGGCTCTCAAGAGCAGAACGTGCGGCCCAATCGAAAATGCACACACATGGCTGAGTAGCGTGCTGACGAACCACGTGACGTGCTCGGACGAGATCGAGAATTCAATTTCGAAATCGGCGGCCATGGATTTAGGGGTTGAAGAGCTGATTGTGAGAGGGAGAAATTCATTGGGGATGTTGGTCTCGATTTGGGGATCGGGCAAAGAAGAGATGGGGTATCCGAGTTGGTTGAAGAAGGGAGATAGGAGGCTGTTGGAGGTTGTGGGGAGAGGAATGAAAGCGGATATAGTGGTGGCGAAGGACGGGAGCGGGAACTTCAAGACGGTGAAGGAGGCGGTTGAGGCGGTGCCGGACAAGAGCAAGAACAGAATTGTGATATATGTGAAGAAGGGGATTTATAAGGAGAATGTGGAAGTGGGGAAGAATAAGAAGAATGTTATGTTGGTCGGAGATGGAGTGGATTCCACTATCATCACTGCTAGCCTCAACGTCGTTGATGGATCAACTACATTTAAGTCTGCAACTGTGGCCGCCGTGGGAGATGGATTTATAGCCCAAGACATCTGGTTCAGAAACACCGCCGGGCCGGAAAAGCACCAAGCGGTGGCACTTCGGGTTGGAGCCGACCAATCCGTCATAAACCGGTGTCGTATCGACGCTTATCAAGACACTCTCTACGCCCATACCAACCGCCAATTCTACCGCGATTCCACCATCACTGGCACCGTGGACTTCATTTTCGGCAACGCCGCCGTGGTATTACAGAACTGCAAAATCGAACCCCGACGTCCGATGAGCAACCAGGCCAACATGGTGACAGCGCAAGGCCGAACAGACCCAAATCAGAACACTGGAACTTCCATCCAAAAATGCCAAATCGTGGCAAGCTCCGACCTGGAGCCGGTTAAGAAGTCCATTAAGACATATTTAGGACGCCCATGGAAGGAGTATTCGAGGACCGTGGTTATGCAGTCCACACTCGGCGATCTCATAGATCCAGCGGGCTGGGCTGAGTGGAATGGGGACTTTGCATTGAAGATGCTGTACTATGGCGAGTATTCTAATAATGGGCCGGGCTCTAATGTTAGCAAACGAGTGAAATGGCCCGGTTACCATGTCATTACGAGCCCAACAGTGGCCCAAAAGTTCACGGTGGACTCACTTATACAAGGAGCTGAATGGCTGGGCTCCTCAGTGGTGAAAGAACGAGAGATAGACATTGGGTACCCAACGGATGTGAAGCATGTATCTCATATCGGGTTGGATAGTACGTCTTCATCCGGTTCAAACCCGAGCTGGATGAATGAATTTAGAACAGGCGATGTGAGTGAAAGAAGAGATTCCAGTTCAACCGCCATAACTGCTCTCACTCATTGGTCCACTCATTCCCAAGCAGAATTCGATGTTTCAATAGGTTACCAATCGGCATCCGACATGTCGATGGAGCTTCAGCAGCCACAACTTCCAAAGAAACCAAAGAAAAAAAGGAATTGCAAGAACAACAAAGTCAAAAGCTTCCTGCAATAA 1953 49.46 MATHEPLLPQPPKTTRPKTFFTVLFFSLLLCSAIFITNKLINSDPSENGHHPFLHNICNMAYNQSSCIQMLASEFPLLQETKTTNAANFLQSFLRKSTSKIVNTIENAKDLRRRINNPRGEAALADCVELMEISMDRITDSILALKSRTCGPIENAHTWLSSVLTNHVTCSDEIENSISKSAAMDLGVEELIVRGRNSLGMLVSIWGSGKEEMGYPSWLKKGDRRLLEVVGRGMKADIVVAKDGSGNFKTVKEAVEAVPDKSKNRIVIYVKKGIYKENVEVGKNKKNVMLVGDGVDSTIITASLNVVDGSTTFKSATVAAVGDGFIAQDIWFRNTAGPEKHQAVALRVGADQSVINRCRIDAYQDTLYAHTNRQFYRDSTITGTVDFIFGNAAVVLQNCKIEPRRPMSNQANMVTAQGRTDPNQNTGTSIQKCQIVASSDLEPVKKSIKTYLGRPWKEYSRTVVMQSTLGDLIDPAGWAEWNGDFALKMLYYGEYSNNGPGSNVSKRVKWPGYHVITSPTVAQKFTVDSLIQGAEWLGSSVVKEREIDIGYPTDVKHVSHIGLDSTSSSGSNPSWMNEFRTGDVSERRDSSSTAITALTHWSTHSQAEFDVSIGYQSASDMSMELQQPQLPKKPKKKRNCKNNKVKSFLQ 650
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 1371909 1374880 + Carg07830-RA Car07g00252 151486
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car07g00252 650 Pfam Plant invertase/pectin methylesterase inhibitor 53 183 IPR006501 GO:0004857
Car07g00252 650 ProSiteProfiles CRIB domain profile. 549 562 IPR000095 -
Car07g00252 650 MobiDBLite consensus disorder prediction 563 579 - -
Car07g00252 650 ProSitePatterns Pectinesterase signature 2. 381 390 IPR033131 -
Car07g00252 650 ProSitePatterns Pectinesterase signature 1. 262 281 IPR018040 -
Car07g00252 650 MobiDBLite consensus disorder prediction 563 591 - -
Car07g00252 650 MobiDBLite consensus disorder prediction 624 650 - -
Car07g00252 650 Pfam Pectinesterase 237 533 IPR000070 GO:0030599|GO:0042545
Car07g00252 650 Pfam P21-Rho-binding domain 548 586 IPR000095 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00989 Car-Chr6:7551686 Car07g00252 Car-Chr7:1371909 3.27E-27 dispersed
Car07g00252 Car-Chr7:1371909 Car17g01016 Car-Chr17:8060470 1.83E-150 dispersed
Car17g01015 Car-Chr17:8052657 Car07g00252 Car-Chr7:1371909 8.96E-130 dispersed
Car20g00926 Car-Chr20:10040547 Car07g00252 Car-Chr7:1371909 6.36E-22 dispersed
Car04g01903 Car-Chr4:11212776 Car07g00252 Car-Chr7:1371909 4.08E-131 transposed
Car06g00148 Car-Chr6:906139 Car07g00252 Car-Chr7:1371909 2.72E-148 transposed
Car13g00583 Car-Chr13:7658292 Car07g00252 Car-Chr7:1371909 3.84E-20 wgd
Car18g00295 Car-Chr18:1778684 Car07g00252 Car-Chr7:1371909 1.75E-19 wgd
Car03g00471 Car-Chr3:5038404 Car07g00252 Car-Chr7:1371909 1.12E-16 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00252 K01051 - csv:101216377 854.358