Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00254 ATGATCTCTTCACTCAGCCTATCTTCTACTTTCGCTTCCTCTGAACTTCTCAACCGAAAATCTCCGATTCCGAGGCTGAATCTTCCGGCGCAGTTTCCGAATCGCAATGCCCTCAAACATCTCGATCGATCTTTTTCTATCAACAAACCACTTCACATCTCATCCGTTGATAATCTTTCTTTGCCCGTAAAATCGTTTGGGCGTTCGACGGAATGCAGGGCGTACGAGGCCGATTCGCGGCGTTTGCAGATTAACGTTGAACTTCCTGAAGAACAGGCAGGTCAGAAACTTAAGATTGGGCTGTATTTCGCCACTTGGTGGGCTTTGAATGTGGTGTTCAATGTATACAACAAGAAGGTTCTTAATGCGTTCCCTTATCCATGGCTCACCTCCACTCTCTCCCTCGCCGCTGGATCGTTTATGATGCTCGTTTCTTGGGCCACTAGAATGGTGGACGCTCCAAAAACCGATTTGGATTTCTGGAAATCCCTGTTGCCGGTGGCGGTGGCGCATACTATTGGGCATGTTGCAGCAACTGTGAGCATGTCCAAAGTCGCTGTCTCATTCACTCACATAATCAAGAGTGGGGAGCCGGCTTTCAGTGTGTTGGTCTCCAGGTTTCTGTTGGGCGAGATGTTTCCATTGCCTGTTTACTTATCTCTTATCCCTATCATTGGAGGCTGCGCTCTTTCCGCACTAACTGAGCTCAATTTCAACATGACTGGATTCATGGGAGCGATGATATCGAACTTGGCATTTGTGTTTAGAAACATATTCTCAAAGAAAGGGATGAAGGGGAAGTCAGTGAGTGGGATGAATTACTATGCTTGCCTTTCAATGCTGTCTCTGCTCATTCTTACTCCTTTCGCCATTGCTGTGGAGGGACCCAAGTTGTGGGCTGAAGGATTTCAACAGGCTCTCTCTCAAATTGGTCCCAATTTCATTTGGTGGTTGGTAGCTCAAAGTATGTTCTACCACTTGTACAATCAAGTGTCATACATGTCTCTTGATCAGATATCTCCATTGACATTCAGCGTAGGGAACACAATGAAGAGAATATTCGTAATAGTGTCGTCCATTATCATCTTCCGCACGCCTGTCCGACCCATCAACGCCATTGGAGCTGCCATTGCAATCCTTGGAACCTTCCTCTACTCGCAGGCCAAGCTGTGA 1173 46.89 MISSLSLSSTFASSELLNRKSPIPRLNLPAQFPNRNALKHLDRSFSINKPLHISSVDNLSLPVKSFGRSTECRAYEADSRRLQINVELPEEQAGQKLKIGLYFATWWALNVVFNVYNKKVLNAFPYPWLTSTLSLAAGSFMMLVSWATRMVDAPKTDLDFWKSLLPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGEMFPLPVYLSLIPIIGGCALSALTELNFNMTGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSMLSLLILTPFAIAVEGPKLWAEGFQQALSQIGPNFIWWLVAQSMFYHLYNQVSYMSLDQISPLTFSVGNTMKRIFVIVSSIIIFRTPVRPINAIGAAIAILGTFLYSQAKL 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1384791 1387011 + Carg07832-RA Car07g00254 151488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00254 390 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 97 389 IPR004696 GO:0016021|GO:0022857|GO:0055085
Car07g00254 390 Pfam Triose-phosphate Transporter family 97 386 IPR004853 -
Car07g00254 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 290 387 - -
Car07g00254 390 PANTHER SOLUTE CARRIER FAMILY 35 37 389 - -
Car07g00254 390 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 37 389 - -
Car07g00254 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 139 234 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00995 Car-Chr6:7584412 Car07g00254 Car-Chr7:1384791 3.93E-99 dispersed
Car07g00254 Car-Chr7:1384791 Car16g00554 Car-Chr16:3501529 0 dispersed
Car03g00473 Car-Chr3:5048716 Car07g00254 Car-Chr7:1384791 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00254 K15283 - csv:101216621 647.121