Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00289 ATGGCAAACGAAACAGAAACAGAAACAGAAACAGAGGAGCTGGATTCAGTTGAGAAAGAAAGAACAATTAAAGTGGTGACCTCTTTACAAAAAAGAGAGGGTCTTTTCATGAACATTTGCCTAACTATACAAAAGATGAATTCTGAAATGGAAAATATGGAAAGGAGAAGGTTTGATAGTTTGGAATCGTGGTCGATGATCCTAGAGTCTGAAAATATGGAAACTTGGGAGACATCAAAGGAGGATCAGGAGGAGTGGACAGCTGATCTCTCTCAGCTCTTCATTGGCAACAAATTTGCCTCCGGTGCGCACAGTCGGATATACCGTGGAATTTATAAGCAGAGAGCCGTTGCTGTGAAGATGGTCAGAATTCCAAACCAAAAGGAGGAAACAAGAGTCAAACTTGAGCAACAATTCAAGTCTGAAGTTGCCTTGCTTTCTCGTCTCTTTCATCCCAGCATAGTTCAGTTCATTGCAGCCTGTAAAAAGCCACCGGTATACTGCATAATTACAGAGTATATGTCACAAGGAACTCTGAGAATGTATCTTAACAAGAAAGAGCCATATTCACTGTCAATAGAGACAATACTGAGGCTAGCTCTAGACATATCAAGAGGAATGGAATACCTTCATTCCCAAGGGGTAATCCACAGAGACCTCAAATCAAATAACTTGCTTCTAAACGATGAAATGAGGGTAAAAGTAGCGGATTTCGGAACCTCCTGCCTCGAAACACAGTGTCGAGAAACAAAAGGGAACATGGGAACTTACAGATGGATGGCGCCGGAGATGATTAAAGAGAAGCCTTACACTCGCAAAGTTGATGTGTACAGCTTTGGGATTGTGCTGTGGGAGCTCACCACGGTTCTGCTTCCGTTTCAAGGGATGACTCCCGTGCAGGCTGCCTTTGCCGTCGCCGAGAAGAATGAGAGGCCGCCATTGCCGGCAAGTTGTCAACCGGCTTTAGCACACCTGATAAAGCGGTGTTGGGCGGCGAATCCATCGAAGCGGCCGGATTTCAGCGACATTGTGGCGGCTTTGGAGAAATACGACGAGTGCGTGAAAGAGGGTCTTCCACTTGCACACCATAAAGGATTGGTAAACCGAAACGCCATTATTGAACGCTTGAAAGCTTGCGCCTCAACCAGTTCTTCAATACCTGTACATGCCTGA 1173 45.1 MANETETETETEELDSVEKERTIKVVTSLQKREGLFMNICLTIQKMNSEMENMERRRFDSLESWSMILESENMETWETSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQKEETRVKLEQQFKSEVALLSRLFHPSIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSIETILRLALDISRGMEYLHSQGVIHRDLKSNNLLLNDEMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTVLLPFQGMTPVQAAFAVAEKNERPPLPASCQPALAHLIKRCWAANPSKRPDFSDIVAALEKYDECVKEGLPLAHHKGLVNRNAIIERLKACASTSSSIPVHA 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1505471 1507650 + Carg07868-RA Car07g00289 151523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00289 390 Pfam Protein tyrosine and serine/threonine kinase 95 347 IPR001245 GO:0004672|GO:0006468
Car07g00289 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Car07g00289 390 ProSiteProfiles Protein kinase domain profile. 93 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00527 Car-Chr3:5281167 Car07g00289 Car-Chr7:1505471 1.02E-180 dispersed
Car07g00289 Car-Chr7:1505471 Car18g00156 Car-Chr18:842274 4.31E-141 dispersed
Car03g00517 Car-Chr3:5208374 Car07g00289 Car-Chr7:1505471 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88971 PF07714 PK_Tyr_Ser-Thr 1.20E-66 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00289 - - cmo:103484647 680.633