Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00311 ATGGCCTCAATTGCTGGTCCCAAAGCTTCCTCAAATCCGCCACAAAAAACAGCCAATGGTGCAATGGCTAATGGGAAACAAACATCAACTGAAGTAGATTCCCCTCACAATGAAGCTAGAAGCTCAGTAGATCAAGAGAAGAAAACATCAGAATATGGAAGTGTAAAGAGCAGTATATGTAGAGGGAGCACGAGCAGTGATATAAGTGAGGAGAGCTCTTGCAGTAGTTTTAGTAGTAGTATCAGTAAACCTCATAAAGCAAATGATTTGAAATGGGAGGCCATTCAAGTTGTTCGTGCCAAAGATGGGGCGATGGGATTAAGCCATTTTAGACTTTTGAAGAAGTTGGGTTGTGGGGATATTGGGAGTGTCTATCTCTCTGAGTTAAGAGGAACAAAATGTCATTTTGCAATGAAGGTTATGGATAAAAATACTTTAGCCAGTCGTAAAAAATCGCTTCGGGCGCAAACCGAAAGAGAAATACTTCAATCCCTTGATCACCCTTTCCTTCCAACATTATACACTCACTTTGAGACAGAGAAATTCTCATGCTTGGTGATGGAGTTCTGCCCTGGAGGAGACTTGCACACTCTTAGACAGAGGCAACCAGGGAAGCATTTTCCTGAGCATGCAGTGAAATTCTATGTAGCAGAGGTTCTTCTTGCACTGGAATATCTGCACATGCTTGGGATTGTGTACCGTGATCTTAAGCCAGAGAATATTCTCGTGAGGGAAGATGGACACATAATGCTTTCAGATTTTGATCTATCTCTCCGTTGTGCTGTTAGTCCAACTCTTGTTAAAAATCTCTCTGCAGAGTCTGAGGCTTTAAGAAAGAACACAGGCTACTGCGTGCAGCCTGCTTGCATTGAGCCATCCTGCATCCAACCATCTTGTGTGGTTCCTACGACCTGCTTTGCACCTCGCCTCTTTTCGAGTAAGTCGAAGAAGGATCGGAAACCGAAAATTGAAATGGGGAATCAGGTCAGTCCATTGCCAGAGCTCATTGCAGAGCCAACTGATGCTCGATCCATGTCTTTCGTTGGTACTCATGAGTACTTGGCACCTGAGATCATCAAGGGTGAAGGGCATGGAAGTGCTGTGGATTGGTGGACTTTTGGTATTTTTCTATATGAGCTACTATTTGGTAAAACTCCTTTTAAGGGGTCTGGAAATCGAGCTACGTTGTTCAACATTGTCGGTCAGCCACTTCGGTTTCCTGATGCACCAGTTGTGAGTTTTGCTGCAAAGGATCTCATAAGAGGATTGCTAGTAAAGAAACCAGAACAAAGATTGGGTAATGAACGTGGAGCAACTGAGATCAAGCAGCATCCTTTTTTTGAAGGTGTGAACTGGGCATTAATACGTTGTGCTACTCCTCCTGAAATCCCAAAGCCGGTTGAGATTGAGAGAATACCACACGCACACGCACACGCACACGCACACGCACACGCATCGACCAGTTTAAAGGCCGTTGCTATTGCAGCTACTGCAGCAGATAAAAAAGCGTCCGATAACTATCTCGAGTTTGATTTCTTTTAG 1542 44.1 MASIAGPKASSNPPQKTANGAMANGKQTSTEVDSPHNEARSSVDQEKKTSEYGSVKSSICRGSTSSDISEESSCSSFSSSISKPHKANDLKWEAIQVVRAKDGAMGLSHFRLLKKLGCGDIGSVYLSELRGTKCHFAMKVMDKNTLASRKKSLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQRQPGKHFPEHAVKFYVAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCAVSPTLVKNLSAESEALRKNTGYCVQPACIEPSCIQPSCVVPTTCFAPRLFSSKSKKDRKPKIEMGNQVSPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNIVGQPLRFPDAPVVSFAAKDLIRGLLVKKPEQRLGNERGATEIKQHPFFEGVNWALIRCATPPEIPKPVEIERIPHAHAHAHAHAHASTSLKAVAIAATAADKKASDNYLEFDFF 513
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1591049 1592689 - Carg07891-RA Car07g00311 151545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00311 513 MobiDBLite consensus disorder prediction 52 83 - -
Car07g00311 513 MobiDBLite consensus disorder prediction 1 83 - -
Car07g00311 513 MobiDBLite consensus disorder prediction 37 51 - -
Car07g00311 513 MobiDBLite consensus disorder prediction 1 36 - -
Car07g00311 513 Pfam Protein kinase domain 344 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00311 513 Pfam Protein kinase domain 111 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00311 513 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
Car07g00311 513 ProSiteProfiles Protein kinase domain profile. 110 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00311 Car-Chr7:1591049 Car18g00579 Car-Chr18:6510796 0 dispersed
Car12g01194 Car-Chr12:11375556 Car07g00311 Car-Chr7:1591049 1.47E-153 dispersed
Car20g00153 Car-Chr20:860798 Car07g00311 Car-Chr7:1591049 2.20E-149 dispersed
Car03g00558 Car-Chr3:5394291 Car07g00311 Car-Chr7:1591049 9.60E-150 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88972 PF00069 Pkinase 1.80E-38 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00311 K08286 - csv:101209748 856.67