Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00322 ATGTTTCCAAGACTTGTGAATCCTGACGGAGATATCCAGATCCATGGCAGCCATGGTTCTGTTGCTTCCGACCTCACTCATCCCCACAGGGGTGATCCTTGTCTCGTTTTGACTTCAGATCCCAAACCTCGACTCCGATGGACTGCCGATCTTCACGAGCGATTCGTCGATGCTGTTACTCAACTCGGTGGTGCTAACAAAGCTACACCAAAAGCAATAATGCGAACAATGAATGTGAAAGGACTGACTCTCTTCCATTTGAAGAGCCACCTCCAGAAATACAGATTAGGTAAGCAATCAGGGAAGGATATGGGTGAGGCCTCTAAAGATGGTGCATATCTTTTAGAAAGTCCAAGTATCAGTAATTTCTCTCCTGACTTGCCAATTTCTGAAATGACCGATGGTTATGAAGTCAAGGAGGCATTAAGAGCACAAATGGAAGTGCAAAGTAAGTTACATCTGCAAGTTGAGGCAGAGAAGCATCTACGAATTCGTCAGGATGCCGAGCGAAGATATTTGGCGATGCTTGAGAGAGCTTGTAAAATGCTTGCAGATCAATTCATTGGAGGTGCGGTATCGGACTCGGACAGCAAGAAGTCTCAAGGACTAGATCGTAAGAGCCCGAGAAGTTCCTCGATCGACCCTCTTGGTTTCTATGCTTCGCAATCACAGGGGATGGAAAGAGCGAATGGCACAGAAGAATTGCAAGGTAATCCTCCTTACCAAAGGGCTGATTGTTCGACCGAAAGCTGCCTAACCTCGAACGAAAGTCCTGGGGGATTGACTATGGAGAAATCTCCTGTGGCAAGCAAGAAAAACATAGTTAACTTGGATTCAGCAAATGCATCTTTGATTGGGATGAAGCTAGGGAAGGAATACAAGATGCTAATATCATCCAAATTAACCATCACGGCGTATCCGAGTGCGACATGTGGGGATGAAATTCTACAAACAAAAACTCATCATGATCCATGA 975 45.33 MFPRLVNPDGDIQIHGSHGSVASDLTHPHRGDPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGANKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPSISNFSPDLPISEMTDGYEVKEALRAQMEVQSKLHLQVEAEKHLRIRQDAERRYLAMLERACKMLADQFIGGAVSDSDSKKSQGLDRKSPRSSSIDPLGFYASQSQGMERANGTEELQGNPPYQRADCSTESCLTSNESPGGLTMEKSPVASKKNIVNLDSANASLIGMKLGKEYKMLISSKLTITAYPSATCGDEILQTKTHHDP 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1626700 1629996 + Carg07902-RA Car07g00322 151556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00322 324 MobiDBLite consensus disorder prediction 191 217 - -
Car07g00322 324 Pfam Myb-like DNA-binding domain 45 95 IPR001005 -
Car07g00322 324 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 39 99 IPR017930 -
Car07g00322 324 Pfam MYB-CC type transfactor, LHEQLE motif 137 182 IPR025756 -
Car07g00322 324 MobiDBLite consensus disorder prediction 231 265 - -
Car07g00322 324 MobiDBLite consensus disorder prediction 1 29 - -
Car07g00322 324 MobiDBLite consensus disorder prediction 231 261 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00322 Car-Chr7:1626700 Car14g01696 Car-Chr14:13483448 4.12E-64 dispersed
Car03g00568 Car-Chr3:5454291 Car07g00322 Car-Chr7:1626700 2.34E-26 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3818 PF00249 Myb_DNA-binding 4.30E-06 CL0123 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00322 - - csv:105435941 510.375